Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.69□□□□□ -1.5
PDX1P52945 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.69□□□□□ -1.5
PDX1P52945 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.69□□□□□ -1.5
PDX1P52945 AC123769.1-201ENST00000530992 3192 ntBASIC5.69□□□□□ -1.5
PDX1P52945 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDX1P52945 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDX1P52945 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDX1P52945 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDX1P52945 AC083799.1-201ENST00000366451 910 ntBASIC5.68□□□□□ -1.5
PDX1P52945 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDX1P52945 AL391422.1-201ENST00000402155 436 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.68□□□□□ -1.5
PDX1P52945 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.68□□□□□ -1.5
PDX1P52945 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 AL355433.1-201ENST00000422804 300 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AL163193.1-201ENST00000444895 788 ntBASIC5.68□□□□□ -1.5
PDX1P52945 EEF1B2P6-201ENST00000445713 673 ntBASIC5.68□□□□□ -1.5
PDX1P52945 RAB28P2-201ENST00000454299 641 ntBASIC5.68□□□□□ -1.5
PDX1P52945 RN7SL799P-201ENST00000475891 298 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 CYP4F27P-201ENST00000514557 494 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.68□□□□□ -1.5
PDX1P52945 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 AC078878.1-201ENST00000539832 958 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 DPPA2P4-201ENST00000563717 878 ntBASIC5.68□□□□□ -1.5
PDX1P52945 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.68□□□□□ -1.5
PDX1P52945 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.68□□□□□ -1.5
PDX1P52945 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 AL021707.7-201ENST00000607991 416 ntBASIC5.68□□□□□ -1.5
PDX1P52945 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AL353684.1-201ENST00000622677 1120 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AL691477.1-201ENST00000624398 162 ntBASIC5.68□□□□□ -1.5
PDX1P52945 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.68□□□□□ -1.5
PDX1P52945 AC087565.3-203ENST00000641018 837 ntBASIC5.68□□□□□ -1.5
PDX1P52945 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
PDX1P52945 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PDX1P52945 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 AC007159.1-201ENST00000566529 4706 ntBASIC5.68□□□□□ -1.5
PDX1P52945 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.68□□□□□ -1.5
PDX1P52945 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDX1P52945 AC022164.1-201ENST00000568767 2673 ntBASIC5.68□□□□□ -1.5
PDX1P52945 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.68□□□□□ -1.5
PDX1P52945 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.68□□□□□ -1.5
PDX1P52945 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 IMMTP1-201ENST00000435590 2219 ntBASIC5.67□□□□□ -1.5
PDX1P52945 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PDX1P52945 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 AC139426.3-201ENST00000605648 2059 ntBASIC5.67□□□□□ -1.5
PDX1P52945 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 AC093297.3-201ENST00000607056 2517 ntBASIC5.67□□□□□ -1.5
PDX1P52945 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PDX1P52945 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDX1P52945 RN7SKP162-201ENST00000363605 345 ntBASIC5.67□□□□□ -1.5
PDX1P52945 SNORA58B-201ENST00000364259 136 ntBASIC5.67□□□□□ -1.5
PDX1P52945 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.67□□□□□ -1.5
PDX1P52945 OR2W4P-201ENST00000406496 926 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.67□□□□□ -1.5
PDX1P52945 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.67□□□□□ -1.5
PDX1P52945 AL731534.1-201ENST00000434711 269 ntBASIC5.67□□□□□ -1.5
PDX1P52945 H3F3BP1-201ENST00000440551 403 ntBASIC5.67□□□□□ -1.5
PDX1P52945 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 RN7SL352P-201ENST00000466002 277 ntBASIC5.67□□□□□ -1.5
PDX1P52945 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PDX1P52945 RPS17P15-201ENST00000475609 349 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AC008410.1-201ENST00000483777 339 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AGGF1P3-201ENST00000493675 1213 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.67□□□□□ -1.5
PDX1P52945 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.67□□□□□ -1.5
PDX1P52945 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.67□□□□□ -1.5
PDX1P52945 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.67□□□□□ -1.5
PDX1P52945 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms