Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 MGAT2P2-201ENST00000427194 797 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.74□□□□□ -0.85
SMARCA4P51532 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AL513533.1-201ENST00000453728 415 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AC021006.3-201ENST00000530771 192 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC005341.1-201ENST00000571086 708 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AL513327.3-201ENST00000602618 469 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AP003789.1-201ENST00000617737 605 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 PARN-201ENST00000341484 2100 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 HSPD1P7-201ENST00000447985 1686 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SMARCA4P51532 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
SMARCA4P51532 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 CHMP1B2P-201ENST00000399581 597 ntBASIC9.73□□□□□ -0.85
SMARCA4P51532 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA4P51532 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA4P51532 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA4P51532 AC008072.1-201ENST00000434254 824 ntBASIC9.73□□□□□ -0.85
SMARCA4P51532 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 RPL12P39-201ENST00000455456 496 ntBASIC9.73□□□□□ -0.85
SMARCA4P51532 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC9.73□□□□□ -0.85
SMARCA4P51532 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
SMARCA4P51532 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.73□□□□□ -0.85
SMARCA4P51532 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
SMARCA4P51532 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
SMARCA4P51532 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 MIPEPP2-201ENST00000422560 1819 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 AC131649.2-201ENST00000624925 4439 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.72□□□□□ -0.85
SMARCA4P51532 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 AC092905.1-201ENST00000467527 949 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 ATP5LP5-201ENST00000483050 299 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 OR5AM1P-201ENST00000532136 1032 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 AC137627.1-201ENST00000545761 289 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 AC099494.2-201ENST00000623371 978 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
SMARCA4P51532 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
SMARCA4P51532 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 THAP12P4-201ENST00000528321 2266 ntBASIC9.72□□□□□ -0.85
SMARCA4P51532 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.72□□□□□ -0.85
SMARCA4P51532 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SMARCA4P51532 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC9.71□□□□□ -0.85
SMARCA4P51532 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.71□□□□□ -0.85
SMARCA4P51532 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 U3.3-201ENST00000362986 216 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.71□□□□□ -0.85
SMARCA4P51532 AL009179.1-201ENST00000406085 265 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 AL133482.1-201ENST00000415988 498 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC9.71□□□□□ -0.85
SMARCA4P51532 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC9.71□□□□□ -0.85
SMARCA4P51532 TPT1P13-201ENST00000449760 499 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC9.71□□□□□ -0.85
SMARCA4P51532 AC021106.1-201ENST00000509020 1058 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC9.71□□□□□ -0.85
SMARCA4P51532 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.71□□□□□ -0.85
SMARCA4P51532 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC9.71□□□□□ -0.85
SMARCA4P51532 AC073575.2-201ENST00000614212 627 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 AC015660.5-201ENST00000623238 564 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC9.71□□□□□ -0.85
SMARCA4P51532 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SMARCA4P51532 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SMARCA4P51532 AC092747.4-201ENST00000620519 1861 ntBASIC9.71□□□□□ -0.85
SMARCA4P51532 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC9.71□□□□□ -0.86
SMARCA4P51532 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms