Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 AC016745.2-201ENST00000608834 3443 ntBASIC5.43□□□□□ -1.54
SOX3P41225 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
SOX3P41225 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SOX3P41225 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 RNA5SP284-201ENST00000384547 118 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX3P41225 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX3P41225 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 AC097523.2-201ENST00000435551 652 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC013410.1-201ENST00000436223 1232 ntBASIC5.43□□□□□ -1.54
SOX3P41225 RPL23AP19-201ENST00000436229 369 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX3P41225 AL663074.2-201ENST00000440621 479 ntBASIC5.43□□□□□ -1.54
SOX3P41225 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX3P41225 AC093166.4-201ENST00000457867 318 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC147055.1-201ENST00000509261 750 ntBASIC5.43□□□□□ -1.54
SOX3P41225 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 RN7SKP288-201ENST00000516227 268 ntBASIC5.43□□□□□ -1.54
SOX3P41225 RNU6-362P-201ENST00000516736 90 ntBASIC5.43□□□□□ -1.54
SOX3P41225 OR4A42P-201ENST00000531397 938 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC079600.1-201ENST00000550326 297 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX3P41225 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX3P41225 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX3P41225 MIR3614-201ENST00000581261 86 ntBASIC5.43□□□□□ -1.54
SOX3P41225 AC060780.2-201ENST00000589047 198 ntBASIC5.43□□□□□ -1.54
SOX3P41225 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 AL139099.4-201ENST00000614802 114 ntBASIC5.43□□□□□ -1.54
SOX3P41225 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX3P41225 AC026124.2-201ENST00000621847 656 ntBASIC5.43□□□□□ -1.54
SOX3P41225 OR11H2-202ENST00000641517 1085 ntBASIC5.43□□□□□ -1.54
SOX3P41225 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SOX3P41225 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SOX3P41225 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SOX3P41225 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX3P41225 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.43□□□□□ -1.54
SOX3P41225 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.43□□□□□ -1.54
SOX3P41225 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.42□□□□□ -1.54
SOX3P41225 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 AL031985.1-201ENST00000392713 418 ntBASIC5.42□□□□□ -1.54
SOX3P41225 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 MTND6P12-201ENST00000428247 522 ntBASIC5.42□□□□□ -1.54
SOX3P41225 BX276092.6-201ENST00000430476 250 ntBASIC5.42□□□□□ -1.54
SOX3P41225 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 RPS12P17-201ENST00000438591 377 ntBASIC5.42□□□□□ -1.54
SOX3P41225 REG1CP-206ENST00000447469 496 ntBASIC5.42□□□□□ -1.54
SOX3P41225 BX276092.8-201ENST00000455722 250 ntBASIC5.42□□□□□ -1.54
SOX3P41225 PFN1P6-201ENST00000476786 399 ntBASIC5.42□□□□□ -1.54
SOX3P41225 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 AC093524.1-201ENST00000564266 1094 ntBASIC5.42□□□□□ -1.54
SOX3P41225 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX3P41225 AC145423.1-201ENST00000605712 336 ntBASIC5.42□□□□□ -1.54
SOX3P41225 AL118556.2-201ENST00000614375 824 ntBASIC5.42□□□□□ -1.54
SOX3P41225 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX3P41225 AC009120.7-201ENST00000623452 780 ntBASIC5.42□□□□□ -1.54
SOX3P41225 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 AC079776.5-201ENST00000641920 211 ntBASIC5.42□□□□□ -1.54
SOX3P41225 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 AC011933.2-201ENST00000578539 2790 ntBASIC5.42□□□□□ -1.54
SOX3P41225 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX3P41225 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
SOX3P41225 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX3P41225 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms