Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC139697.1-201ENST00000548429 745 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 AGGF1P7-201ENST00000562369 913 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGCLP35914 MIR6861-201ENST00000618657 64 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC087565.3-203ENST00000641018 837 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 AC091305.2-201ENST00000624049 1576 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 AC015689.2-201ENST00000528172 1738 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HMGCLP35914 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.7□□□□□ -1.5
HMGCLP35914 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
HMGCLP35914 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCLP35914 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 AC005261.6-201ENST00000623072 1387 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCLP35914 OR13C1P-202ENST00000641378 2919 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AC011933.2-201ENST00000578539 2790 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCLP35914 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
HMGCLP35914 SNORA64.1-201ENST00000362600 132 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 RNA5SP394-201ENST00000364216 119 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 RN7SKP15-201ENST00000364742 309 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 RN7SKP292-201ENST00000365522 317 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 RNA5SP30-201ENST00000365552 115 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMGCLP35914 PEX12P1-201ENST00000400284 1048 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 HMGB1P20-201ENST00000402555 677 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AC009506.2-201ENST00000420635 840 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 IPPKP1-201ENST00000422501 768 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 RPL23AP19-201ENST00000436229 369 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 CYCSP51-201ENST00000443545 318 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 LRRC37A14P-201ENST00000452297 462 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AC144530.1-201ENST00000452862 555 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 OR7E157P-201ENST00000494376 911 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 PSMA2P2-201ENST00000504319 686 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 SNORD46.2-201ENST00000516021 102 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 MRPS16P1-201ENST00000523462 412 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 AL034374.2-201ENST00000605281 548 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCLP35914 MIR193BHG-214ENST00000641765 509 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HMGCLP35914 AC027279.1-201ENST00000568885 4284 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
HMGCLP35914 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCLP35914 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 CASC19-260ENST00000641828 2001 ntBASIC5.69□□□□□ -1.5
HMGCLP35914 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCLP35914 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCLP35914 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGCLP35914 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 U3.10-201ENST00000364459 214 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 RNA5SP284-201ENST00000384547 118 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGCLP35914 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC079807.1-201ENST00000429993 481 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC242426.1-201ENST00000435270 960 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCLP35914 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 AC073109.1-201ENST00000445066 978 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCLP35914 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCLP35914 UBFD1P1-201ENST00000473259 814 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC087672.1-201ENST00000479876 766 ntBASIC5.68□□□□□ -1.5
HMGCLP35914 AC021146.10-201ENST00000515628 706 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms