Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RBMX2P2-201ENST00000257020 946 ntBASIC7.95□□□□□ -1.14
RFX1P22670 SNORA73B-201ENST00000363217 204 ntBASIC7.95□□□□□ -1.14
RFX1P22670 RN7SKP36-201ENST00000363997 312 ntBASIC7.95□□□□□ -1.14
RFX1P22670 Y_RNA.516-201ENST00000384541 124 ntBASIC7.95□□□□□ -1.14
RFX1P22670 RNU6-1263P-201ENST00000384601 106 ntBASIC7.95□□□□□ -1.14
RFX1P22670 U3.28-201ENST00000391249 210 ntBASIC7.95□□□□□ -1.14
RFX1P22670 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 PTMAP8-201ENST00000397729 342 ntBASIC7.95□□□□□ -1.14
RFX1P22670 SNORA3.1-201ENST00000408166 111 ntBASIC7.95□□□□□ -1.14
RFX1P22670 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.95□□□□□ -1.14
RFX1P22670 SEPT7P5-201ENST00000434048 306 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC008072.1-201ENST00000434254 824 ntBASIC7.95□□□□□ -1.14
RFX1P22670 MTATP6P23-201ENST00000440153 476 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AL356121.1-201ENST00000442911 156 ntBASIC7.95□□□□□ -1.14
RFX1P22670 IGBP1P3-201ENST00000447449 1000 ntBASIC7.95□□□□□ -1.14
RFX1P22670 RPL31P44-201ENST00000447680 377 ntBASIC7.95□□□□□ -1.14
RFX1P22670 PPIAP32-201ENST00000449940 472 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.95□□□□□ -1.14
RFX1P22670 MTND1P16-201ENST00000465177 898 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC008620.1-201ENST00000468453 592 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC040975.1-201ENST00000472104 316 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC066616.1-201ENST00000486795 413 ntBASIC7.95□□□□□ -1.14
RFX1P22670 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.95□□□□□ -1.14
RFX1P22670 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AC016559.1-201ENST00000511420 199 ntBASIC7.95□□□□□ -1.14
RFX1P22670 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 CHEK2P2-201ENST00000554701 672 ntBASIC7.95□□□□□ -1.14
RFX1P22670 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.95□□□□□ -1.14
RFX1P22670 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 AC025594.3-201ENST00000613068 790 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC006335.3-201ENST00000613408 292 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC135050.6-202ENST00000613584 392 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AL353726.1-201ENST00000614041 1000 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC010678.1-201ENST00000614118 713 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AC025588.4-201ENST00000615802 908 ntBASIC7.95□□□□□ -1.14
RFX1P22670 MIR7844-201ENST00000616161 122 ntBASIC7.95□□□□□ -1.14
RFX1P22670 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 MIR8089-201ENST00000620165 82 ntBASIC7.95□□□□□ -1.14
RFX1P22670 AL138693.1-201ENST00000622219 129 ntBASIC7.95□□□□□ -1.14
RFX1P22670 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 AC099063.3-201ENST00000642066 185 ntBASIC7.95□□□□□ -1.14
RFX1P22670 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 AC109315.1-201ENST00000584143 1347 ntBASIC7.95□□□□□ -1.14
RFX1P22670 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.95□□□□□ -1.14
RFX1P22670 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RFX1P22670 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
RFX1P22670 EEF1A1P16-201ENST00000325349 1414 ntBASIC7.95□□□□□ -1.14
RFX1P22670 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 AC020978.8-201ENST00000571975 3022 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC079178.2-201ENST00000439323 1624 ntBASIC7.94□□□□□ -1.14
RFX1P22670 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 AL121657.1-201ENST00000327215 531 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RNU4-91P-201ENST00000364778 135 ntBASIC7.94□□□□□ -1.14
RFX1P22670 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RFX1P22670 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
RFX1P22670 AL034374.1-201ENST00000406329 351 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RNU2-18P-201ENST00000411224 162 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 AL593856.1-201ENST00000419949 805 ntBASIC7.94□□□□□ -1.14
RFX1P22670 EEF1GP7-201ENST00000422983 703 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AL050321.1-201ENST00000432363 400 ntBASIC7.94□□□□□ -1.14
RFX1P22670 BX119917.1-201ENST00000432517 502 ntBASIC7.94□□□□□ -1.14
RFX1P22670 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms