Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 NDUFA5P5-201ENST00000468361 342 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC093719.1-201ENST00000480427 441 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 RN7SL57P-201ENST00000493687 290 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 PCNAP4-201ENST00000532690 730 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AL356801.1-201ENST00000559320 294 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 MIR6861-201ENST00000618657 64 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AC022400.9-201ENST00000623633 273 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 OR11H2-202ENST00000641517 1085 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 PDZK1P1-202ENST00000425209 1350 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 AL158152.1-201ENST00000602652 1435 ntBASIC5.89□□□□□ -1.47
HLA-DPA1P20036 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HLA-DPA1P20036 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC003985.2-201ENST00000562268 1669 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 RNA5SP477-201ENST00000362639 119 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 RNU6-697P-201ENST00000363348 107 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 RN7SKP78-201ENST00000364711 318 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 OR13C3-201ENST00000374781 1108 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC019205.1-201ENST00000421830 730 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL138787.1-202ENST00000437804 898 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC094085.1-201ENST00000468914 584 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC026782.2-201ENST00000510845 636 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC006530.1-201ENST00000555980 571 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AL133481.2-203ENST00000607558 139 ntBASIC5.88□□□□□ -1.47
HLA-DPA1P20036 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HLA-DPA1P20036 AC239868.2-201ENST00000564237 4527 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 RNA5SP273-201ENST00000362484 113 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 SUGT1P2-201ENST00000379452 992 ntBASIC5.87□□□□□ -1.47
HLA-DPA1P20036 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
HLA-DPA1P20036 SNORA79B-201ENST00000410557 148 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms