Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 SAMMSON-210ENST00000641260 1308 ntBASIC7.64□□□□□ -1.19
LIG1P18858 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 AL136310.1-201ENST00000404926 654 ntBASIC7.64□□□□□ -1.19
LIG1P18858 RNU4-64P-201ENST00000410795 131 ntBASIC7.64□□□□□ -1.19
LIG1P18858 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.64□□□□□ -1.19
LIG1P18858 MTND4LP21-201ENST00000415303 295 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AC239367.3-201ENST00000428996 814 ntBASIC7.64□□□□□ -1.19
LIG1P18858 C8orf59P1-201ENST00000429930 303 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AL606490.7-201ENST00000433136 191 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 AC083855.1-201ENST00000440041 258 ntBASIC7.64□□□□□ -1.19
LIG1P18858 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 TRY2P-201ENST00000448860 689 ntBASIC7.64□□□□□ -1.19
LIG1P18858 PPIAP32-201ENST00000449940 472 ntBASIC7.64□□□□□ -1.19
LIG1P18858 RPL12P26-201ENST00000452430 487 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 RN7SL492P-201ENST00000460700 295 ntBASIC7.64□□□□□ -1.19
LIG1P18858 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 MTND3P5-201ENST00000512798 333 ntBASIC7.64□□□□□ -1.19
LIG1P18858 SNORA81.2-201ENST00000516868 170 ntBASIC7.64□□□□□ -1.19
LIG1P18858 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC7.64□□□□□ -1.19
LIG1P18858 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.64□□□□□ -1.19
LIG1P18858 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
LIG1P18858 DPRXP5-201ENST00000604662 539 ntBASIC7.64□□□□□ -1.19
LIG1P18858 OR51C1P-201ENST00000608504 942 ntBASIC7.64□□□□□ -1.19
LIG1P18858 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
LIG1P18858 CASC19-274ENST00000642018 970 ntBASIC7.64□□□□□ -1.19
LIG1P18858 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
LIG1P18858 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 AL157831.2-201ENST00000564681 3095 ntBASIC7.64□□□□□ -1.19
LIG1P18858 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
LIG1P18858 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
LIG1P18858 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
LIG1P18858 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 MAPK10-357ENST00000641831 2858 ntBASIC7.63□□□□□ -1.19
LIG1P18858 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 MTHFD2P5-201ENST00000320415 844 ntBASIC7.63□□□□□ -1.19
LIG1P18858 STAG3L4-201ENST00000352103 530 ntBASIC7.63□□□□□ -1.19
LIG1P18858 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 SNORD113-6-201ENST00000363345 75 ntBASIC7.63□□□□□ -1.19
LIG1P18858 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 CXADRP1-201ENST00000398098 1095 ntBASIC7.63□□□□□ -1.19
LIG1P18858 TAF9BP2-201ENST00000400856 499 ntBASIC7.63□□□□□ -1.19
LIG1P18858 CYCSP17-201ENST00000407870 315 ntBASIC7.63□□□□□ -1.19
LIG1P18858 CBX1P3-201ENST00000413296 527 ntBASIC7.63□□□□□ -1.19
LIG1P18858 LINC01881-201ENST00000416103 412 ntBASIC7.63□□□□□ -1.19
LIG1P18858 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 MYL6P3-201ENST00000436904 432 ntBASIC7.63□□□□□ -1.19
LIG1P18858 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
LIG1P18858 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 RPS27AP8-201ENST00000452665 445 ntBASIC7.63□□□□□ -1.19
LIG1P18858 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 RPS12P31-201ENST00000491419 398 ntBASIC7.63□□□□□ -1.19
LIG1P18858 NPM1P27-201ENST00000502784 830 ntBASIC7.63□□□□□ -1.19
LIG1P18858 HMGB1P3-201ENST00000502802 616 ntBASIC7.63□□□□□ -1.19
LIG1P18858 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.63□□□□□ -1.19
LIG1P18858 AC116353.3-201ENST00000511215 249 ntBASIC7.63□□□□□ -1.19
LIG1P18858 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
LIG1P18858 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 OR52K3P-201ENST00000531655 943 ntBASIC7.63□□□□□ -1.19
LIG1P18858 AC140063.1-201ENST00000541343 259 ntBASIC7.63□□□□□ -1.19
LIG1P18858 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.63□□□□□ -1.19
LIG1P18858 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms