Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.36□□□□□ -0.91
CFTRP13569 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC9.36□□□□□ -0.91
CFTRP13569 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
CFTRP13569 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.35□□□□□ -0.91
CFTRP13569 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CFTRP13569 RPSAP35-201ENST00000413753 818 ntBASIC9.35□□□□□ -0.91
CFTRP13569 AL133482.1-201ENST00000415988 498 ntBASIC9.35□□□□□ -0.91
CFTRP13569 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.35□□□□□ -0.91
CFTRP13569 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.35□□□□□ -0.91
CFTRP13569 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.35□□□□□ -0.91
CFTRP13569 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC9.35□□□□□ -0.91
CFTRP13569 AC008072.1-201ENST00000434254 824 ntBASIC9.35□□□□□ -0.91
CFTRP13569 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.35□□□□□ -0.91
CFTRP13569 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC9.35□□□□□ -0.91
CFTRP13569 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.35□□□□□ -0.91
CFTRP13569 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.35□□□□□ -0.91
CFTRP13569 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.35□□□□□ -0.91
CFTRP13569 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.35□□□□□ -0.91
CFTRP13569 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
CFTRP13569 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.35□□□□□ -0.91
CFTRP13569 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC9.35□□□□□ -0.91
CFTRP13569 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CFTRP13569 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.34□□□□□ -0.91
CFTRP13569 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
CFTRP13569 AP003170.5-201ENST00000397185 335 ntBASIC9.34□□□□□ -0.91
CFTRP13569 NUDT19P3-201ENST00000404698 555 ntBASIC9.34□□□□□ -0.91
CFTRP13569 RNF10P1-201ENST00000418589 369 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AC016712.1-201ENST00000431088 378 ntBASIC9.34□□□□□ -0.91
CFTRP13569 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.34□□□□□ -0.91
CFTRP13569 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.34□□□□□ -0.91
CFTRP13569 AC005341.1-201ENST00000571086 708 ntBASIC9.34□□□□□ -0.91
CFTRP13569 MIR5096-201ENST00000583713 70 ntBASIC9.34□□□□□ -0.91
CFTRP13569 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC9.34□□□□□ -0.91
CFTRP13569 HIRAP1-201ENST00000605318 787 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AL023583.1-201ENST00000607518 1143 ntBASIC9.34□□□□□ -0.91
CFTRP13569 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CFTRP13569 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.34□□□□□ -0.91
CFTRP13569 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.34□□□□□ -0.91
CFTRP13569 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CFTRP13569 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 AC132825.1-201ENST00000463573 2247 ntBASIC9.34□□□□□ -0.91
CFTRP13569 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CFTRP13569 NPM1P40-201ENST00000412758 733 ntBASIC9.34□□□□□ -0.91
CFTRP13569 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.34□□□□□ -0.91
CFTRP13569 OR2AM1P-201ENST00000422137 422 ntBASIC9.34□□□□□ -0.91
CFTRP13569 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.34□□□□□ -0.91
CFTRP13569 PDCL3P4-201ENST00000489621 720 ntBASIC9.34□□□□□ -0.91
CFTRP13569 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CFTRP13569 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC9.34□□□□□ -0.91
CFTRP13569 AC021006.3-201ENST00000530771 192 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AC008033.2-201ENST00000542626 177 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AC067852.5-201ENST00000589299 310 ntBASIC9.34□□□□□ -0.91
CFTRP13569 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CFTRP13569 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.33□□□□□ -0.92
CFTRP13569 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 AL078621.3-201ENST00000623707 2042 ntBASIC9.33□□□□□ -0.92
CFTRP13569 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.33□□□□□ -0.92
CFTRP13569 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 AC068538.1-201ENST00000376856 336 ntBASIC9.33□□□□□ -0.92
CFTRP13569 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.33□□□□□ -0.92
CFTRP13569 RPL12P17-201ENST00000432393 498 ntBASIC9.33□□□□□ -0.92
CFTRP13569 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 AC104634.1-201ENST00000452720 462 ntBASIC9.33□□□□□ -0.92
CFTRP13569 AL445687.2-201ENST00000458156 728 ntBASIC9.33□□□□□ -0.92
CFTRP13569 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 RN7SL205P-201ENST00000490174 284 ntBASIC9.33□□□□□ -0.92
CFTRP13569 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.33□□□□□ -0.92
CFTRP13569 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.33□□□□□ -0.92
CFTRP13569 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC9.33□□□□□ -0.92
CFTRP13569 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
CFTRP13569 MIR4301-201ENST00000577203 66 ntBASIC9.33□□□□□ -0.92
CFTRP13569 RN7SL52P-201ENST00000584271 284 ntBASIC9.33□□□□□ -0.92
CFTRP13569 AP003789.1-201ENST00000617737 605 ntBASIC9.33□□□□□ -0.92
CFTRP13569 RN7SL722P-201ENST00000617780 284 ntBASIC9.33□□□□□ -0.92
CFTRP13569 RN7SL565P-201ENST00000618246 284 ntBASIC9.33□□□□□ -0.92
CFTRP13569 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CFTRP13569 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms