Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC004980.4-201ENST00000513375 203 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 RN7SKP147-201ENST00000517154 244 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC134349.2-201ENST00000535136 910 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC9.55□□□□□ -0.88
TOP2AP11388 AC060766.1-201ENST00000590824 627 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 AL133481.2-203ENST00000607558 139 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 AC112694.2-201ENST00000623697 768 ntBASIC9.55□□□□□ -0.88
TOP2AP11388 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.55□□□□□ -0.88
TOP2AP11388 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TOP2AP11388 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
TOP2AP11388 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.54□□□□□ -0.88
TOP2AP11388 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
TOP2AP11388 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
TOP2AP11388 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
TOP2AP11388 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 AC096921.1-201ENST00000411661 375 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 AC211486.3-201ENST00000412694 621 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC9.54□□□□□ -0.88
TOP2AP11388 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC9.54□□□□□ -0.88
TOP2AP11388 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC9.54□□□□□ -0.88
TOP2AP11388 OR11H3P-201ENST00000554547 982 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.54□□□□□ -0.88
TOP2AP11388 AC005341.1-201ENST00000571086 708 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 AC104785.1-201ENST00000603220 588 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 AC135068.5-201ENST00000624197 983 ntBASIC9.54□□□□□ -0.88
TOP2AP11388 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC9.54□□□□□ -0.88
TOP2AP11388 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TOP2AP11388 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.54□□□□□ -0.88
TOP2AP11388 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.54□□□□□ -0.88
TOP2AP11388 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOP2AP11388 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TOP2AP11388 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TOP2AP11388 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOP2AP11388 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
TOP2AP11388 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC9.53□□□□□ -0.88
TOP2AP11388 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.53□□□□□ -0.88
TOP2AP11388 MIR7703-201ENST00000620784 77 ntBASIC9.53□□□□□ -0.88
TOP2AP11388 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TOP2AP11388 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOP2AP11388 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TOP2AP11388 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC9.53□□□□□ -0.88
TOP2AP11388 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
TOP2AP11388 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
TOP2AP11388 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.52□□□□□ -0.88
TOP2AP11388 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.88
TOP2AP11388 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
TOP2AP11388 RN7SKP95-201ENST00000362860 303 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
TOP2AP11388 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.52□□□□□ -0.88
TOP2AP11388 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.52□□□□□ -0.88
TOP2AP11388 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.52□□□□□ -0.88
TOP2AP11388 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC9.52□□□□□ -0.88
TOP2AP11388 BRD9P1-201ENST00000529855 560 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 AC063949.1-201ENST00000552900 865 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC9.52□□□□□ -0.88
TOP2AP11388 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
TOP2AP11388 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
TOP2AP11388 MIR4691-201ENST00000583764 85 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 AP003789.1-201ENST00000617737 605 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.52□□□□□ -0.88
TOP2AP11388 MTCO1P1-201ENST00000624263 1081 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 AP000550.3-201ENST00000637734 379 ntBASIC9.52□□□□□ -0.88
TOP2AP11388 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.52□□□□□ -0.89
TOP2AP11388 AC007114.2-201ENST00000576014 4281 ntBASIC9.52□□□□□ -0.89
TOP2AP11388 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.52□□□□□ -0.89
TOP2AP11388 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.52□□□□□ -0.89
TOP2AP11388 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC9.52□□□□□ -0.89
TOP2AP11388 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC9.52□□□□□ -0.89
TOP2AP11388 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.51□□□□□ -0.89
TOP2AP11388 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC9.51□□□□□ -0.89
TOP2AP11388 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC9.51□□□□□ -0.89
TOP2AP11388 AL772161.1-201ENST00000439130 476 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AL390879.1-201ENST00000439143 386 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AC093890.1-201ENST00000502554 540 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 YWHABP2-201ENST00000540201 713 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC9.51□□□□□ -0.89
TOP2AP11388 ELOCP28-201ENST00000590044 317 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 AC009237.13-201ENST00000603193 276 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC9.51□□□□□ -0.89
TOP2AP11388 UGP2-232ENST00000640075 567 ntTSL 5 BASIC9.51□□□□□ -0.89
TOP2AP11388 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
TOP2AP11388 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 OR9K1P-202ENST00000641111 3217 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 AC140479.2-201ENST00000421567 3130 ntBASIC9.51□□□□□ -0.89
TOP2AP11388 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC9.51□□□□□ -0.89
TOP2AP11388 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
TOP2AP11388 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms