Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.72□□□□□ -1.33
TOP1P11387 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TOP1P11387 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
TOP1P11387 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TOP1P11387 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TOP1P11387 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.71□□□□□ -1.34
TOP1P11387 Z84478.1-201ENST00000438230 1219 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 AC109481.1-201ENST00000509173 282 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AC106872.4-201ENST00000510050 523 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.71□□□□□ -1.34
TOP1P11387 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.71□□□□□ -1.34
TOP1P11387 MIR4505-201ENST00000582238 73 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 MIR6729-201ENST00000618194 65 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TOP1P11387 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP1P11387 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TOP1P11387 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TOP1P11387 AC239868.2-201ENST00000564237 4527 ntBASIC6.71□□□□□ -1.34
TOP1P11387 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP1P11387 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TOP1P11387 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TOP1P11387 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 AC130360.2-201ENST00000533477 1556 ntBASIC6.7□□□□□ -1.34
TOP1P11387 AC138907.8-201ENST00000623981 2256 ntBASIC6.7□□□□□ -1.34
TOP1P11387 AC140134.1-201ENST00000511830 3544 ntBASIC6.7□□□□□ -1.34
TOP1P11387 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 MRE11P1-201ENST00000464884 2127 ntBASIC6.7□□□□□ -1.34
TOP1P11387 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
TOP1P11387 MIR323A-201ENST00000362199 86 ntBASIC6.7□□□□□ -1.34
TOP1P11387 RNA5SP242-201ENST00000364171 118 ntBASIC6.7□□□□□ -1.34
TOP1P11387 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 EEF1B2P6-201ENST00000445713 673 ntBASIC6.7□□□□□ -1.34
TOP1P11387 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 AC074087.1-201ENST00000512059 724 ntBASIC6.7□□□□□ -1.34
TOP1P11387 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.7□□□□□ -1.34
TOP1P11387 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP1P11387 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.7□□□□□ -1.34
TOP1P11387 AC022404.1-201ENST00000555320 273 ntBASIC6.7□□□□□ -1.34
TOP1P11387 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 SNORD95-201ENST00000579879 68 ntBASIC6.7□□□□□ -1.34
TOP1P11387 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP1P11387 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.7□□□□□ -1.34
TOP1P11387 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
TOP1P11387 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TOP1P11387 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 SRRM1P3-201ENST00000426911 2678 ntBASIC6.69□□□□□ -1.34
TOP1P11387 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP1P11387 MIR323B-201ENST00000385269 82 ntBASIC6.69□□□□□ -1.34
TOP1P11387 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TOP1P11387 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP1P11387 AL596448.1-201ENST00000415024 392 ntBASIC6.69□□□□□ -1.34
TOP1P11387 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP1P11387 AL354868.1-201ENST00000417077 482 ntBASIC6.69□□□□□ -1.34
TOP1P11387 NENFP1-201ENST00000419476 466 ntBASIC6.69□□□□□ -1.34
TOP1P11387 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms