Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.5□□□□□ -1.37
HOXC6P09630 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 AL355032.1-201ENST00000472981 438 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXC6P09630 MIR2117-201ENST00000516780 80 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC6P09630 HMGN2P6-201ENST00000551091 273 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC6P09630 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC6P09630 RPSAP73-201ENST00000614820 330 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 AC132068.1-201ENST00000623805 459 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXC6P09630 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 AC018765.1-201ENST00000623357 3446 ntBASIC6.5□□□□□ -1.37
HOXC6P09630 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HOXC6P09630 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
HOXC6P09630 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXC6P09630 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC6P09630 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
HOXC6P09630 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
HOXC6P09630 RNU4-2-201ENST00000365668 141 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC6P09630 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC6P09630 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXC6P09630 AC072052.1-201ENST00000496556 306 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC6P09630 EIF4A2P5-201ENST00000529914 499 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC6P09630 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC6P09630 AC006518.1-201ENST00000541449 943 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 AL121594.2-201ENST00000541658 472 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 HSPE1P2-201ENST00000554777 306 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 MIR132-201ENST00000591554 101 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 AL021368.1-201ENST00000607490 540 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 AL139407.1-201ENST00000613826 1175 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 SAMMSON-209ENST00000641222 1100 ntBASIC6.49□□□□□ -1.37
HOXC6P09630 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXC6P09630 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXC6P09630 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HOXC6P09630 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXC6P09630 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 AC007998.4-201ENST00000612496 2533 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 IMMTP1-201ENST00000435590 2219 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 RN7SKP28-201ENST00000364770 305 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 RN7SKP125-201ENST00000410481 302 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 AL731534.1-201ENST00000434711 269 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC6P09630 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 AP000547.1-201ENST00000454360 617 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 RN7SL51P-201ENST00000468230 285 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC6P09630 RN7SL222P-201ENST00000476452 299 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 RPS4XP1-201ENST00000482189 787 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 RWDD4P1-201ENST00000488019 565 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXC6P09630 AC111000.5-201ENST00000506559 1178 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
HOXC6P09630 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC6P09630 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXC6P09630 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXC6P09630 AC007346.2-201ENST00000564816 892 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 MRPS21P9-201ENST00000571150 257 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXC6P09630 AC006115.2-201ENST00000596823 202 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXC6P09630 NANOGP3-201ENST00000605855 286 ntBASIC6.48□□□□□ -1.37
HOXC6P09630 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXC6P09630 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms