Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RPL31P44-201ENST00000447680 377 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 RPS18P1-201ENST00000447840 458 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGB1P09429 PPIAP21-201ENST00000464473 501 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGB1P09429 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGB1P09429 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGB1P09429 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 AC090115.2-201ENST00000548060 883 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 AC127381.1-201ENST00000555979 939 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGB1P09429 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGB1P09429 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.45□□□□□ -1.22
HMGB1P09429 DYNLL1P1-201ENST00000595442 269 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.45□□□□□ -1.22
HMGB1P09429 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
HMGB1P09429 MIR6811-201ENST00000620409 58 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 SMG1P6-201ENST00000532337 2930 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGB1P09429 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 AC010266.2-201ENST00000564741 3255 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC7.45□□□□□ -1.22
HMGB1P09429 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
HMGB1P09429 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
HMGB1P09429 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HMGB1P09429 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 AC011155.1-201ENST00000316512 456 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 IGKV7-3-201ENST00000357453 298 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.44□□□□□ -1.22
HMGB1P09429 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGB1P09429 AC023141.6-201ENST00000429418 337 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 BX119904.1-201ENST00000432026 348 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AL450263.2-201ENST00000439400 589 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 CBX1P4-201ENST00000439415 457 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 SOCS5P1-201ENST00000440415 949 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 PA2G4P1-201ENST00000442248 1197 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AC079922.1-201ENST00000443291 359 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 RPS27AP3-201ENST00000453803 454 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.44□□□□□ -1.22
HMGB1P09429 RANP2-201ENST00000456833 229 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 MARK2P8-201ENST00000476069 952 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 GM2AP2-201ENST00000491764 562 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HMGB1P09429 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.44□□□□□ -1.22
HMGB1P09429 AC025768.1-201ENST00000510057 267 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGB1P09429 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGB1P09429 AL390334.1-201ENST00000556395 450 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AC025918.2-201ENST00000558683 763 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 RBM22P12-201ENST00000567098 1255 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.44□□□□□ -1.22
HMGB1P09429 RN7SL66P-201ENST00000582099 264 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.44□□□□□ -1.22
HMGB1P09429 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.44□□□□□ -1.22
HMGB1P09429 AL589765.6-201ENST00000601909 549 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 KATNBL1P5-201ENST00000605015 517 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 AC116563.2-201ENST00000624751 535 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.44□□□□□ -1.22
HMGB1P09429 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 MFSD8-239ENST00000641590 2479 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 CASC19-246ENST00000641625 1606 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 NEPNP-201ENST00000404786 1371 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HMGB1P09429 GTF2H2B-203ENST00000508065 1432 ntBASIC7.44□□□□□ -1.22
HMGB1P09429 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P09429 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC091305.2-201ENST00000624049 1576 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P09429 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P09429 RNU6-317P-201ENST00000384031 107 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL445238.1-204ENST00000400311 463 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AL133260.1-201ENST00000405720 405 ntBASIC7.43□□□□□ -1.22
HMGB1P09429 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms