Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC090607.5-201ENST00000615692 224 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AC016769.4-201ENST00000616893 535 ntBASIC6.38□□□□□ -1.39
MMP3P08254 CASC19-264ENST00000641912 1184 ntBASIC6.38□□□□□ -1.39
MMP3P08254 AP004607.3-201ENST00000530354 3915 ntBASIC6.38□□□□□ -1.39
MMP3P08254 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.38□□□□□ -1.39
MMP3P08254 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.38□□□□□ -1.39
MMP3P08254 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
MMP3P08254 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.38□□□□□ -1.39
MMP3P08254 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.38□□□□□ -1.39
MMP3P08254 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MMP3P08254 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.38□□□□□ -1.39
MMP3P08254 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 AC022034.1-201ENST00000512867 2156 ntBASIC6.37□□□□□ -1.39
MMP3P08254 C4BPAP1-201ENST00000415474 1893 ntBASIC6.37□□□□□ -1.39
MMP3P08254 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 PABPC1P6-201ENST00000445594 1829 ntBASIC6.37□□□□□ -1.39
MMP3P08254 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 AC109780.1-201ENST00000451768 1344 ntBASIC6.37□□□□□ -1.39
MMP3P08254 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MMP3P08254 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MMP3P08254 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MMP3P08254 BX119904.3-201ENST00000428194 957 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.37□□□□□ -1.39
MMP3P08254 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MMP3P08254 AC096775.1-201ENST00000437724 448 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 AC019185.1-201ENST00000442718 389 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AL606490.1-201ENST00000452266 765 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 RN7SL610P-201ENST00000463845 291 ntBASIC6.37□□□□□ -1.39
MMP3P08254 OR2AO1P-201ENST00000476497 403 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AC023818.1-201ENST00000498379 384 ntBASIC6.37□□□□□ -1.39
MMP3P08254 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MMP3P08254 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 AC092944.2-201ENST00000605443 889 ntBASIC6.37□□□□□ -1.39
MMP3P08254 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.37□□□□□ -1.39
MMP3P08254 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.37□□□□□ -1.39
MMP3P08254 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MMP3P08254 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.37□□□□□ -1.39
MMP3P08254 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 LINC01963-201ENST00000562038 3148 ntBASIC6.36□□□□□ -1.39
MMP3P08254 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AC114876.1-201ENST00000490962 1366 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
MMP3P08254 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
MMP3P08254 RNA5SP319-201ENST00000362768 119 ntBASIC6.36□□□□□ -1.39
MMP3P08254 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 MIR130A-201ENST00000385274 89 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AC009804.1-201ENST00000400949 179 ntBASIC6.36□□□□□ -1.39
MMP3P08254 SPTLC1P2-201ENST00000407089 121 ntBASIC6.36□□□□□ -1.39
MMP3P08254 RNU4-34P-201ENST00000410431 124 ntBASIC6.36□□□□□ -1.39
MMP3P08254 RPL35AP24-201ENST00000413846 330 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.36□□□□□ -1.39
MMP3P08254 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MMP3P08254 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 RN7SL727P-201ENST00000482164 296 ntBASIC6.36□□□□□ -1.39
MMP3P08254 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.36□□□□□ -1.39
MMP3P08254 AC006499.3-201ENST00000506077 748 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.36□□□□□ -1.39
MMP3P08254 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.36□□□□□ -1.39
MMP3P08254 AC126615.2-201ENST00000553003 515 ntBASIC6.36□□□□□ -1.39
MMP3P08254 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.36□□□□□ -1.39
MMP3P08254 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.36□□□□□ -1.39
MMP3P08254 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.36□□□□□ -1.39
MMP3P08254 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms