Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SETP3-201ENST00000581726 813 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 OR7A8P-201ENST00000595427 913 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AL139099.4-201ENST00000614802 114 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 MIR6071-201ENST00000616741 78 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC245014.3-201ENST00000618589 347 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 AC138965.3-201ENST00000623875 498 ntBASIC5.08□□□□□ -1.6
HLA-DPB1P04440 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HLA-DPB1P04440 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CAP1P2-201ENST00000417455 1409 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 MFSD8-219ENST00000641228 2559 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 RN7SKP77-201ENST00000363261 353 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC004386.1-201ENST00000393214 761 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CXADRP1-201ENST00000398098 1095 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AL096711.1-201ENST00000404780 554 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AL354890.1-201ENST00000413730 346 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 RPL35AP3-201ENST00000414680 288 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 HYALP1-201ENST00000417674 1279 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 TMEM183AP1-205ENST00000432739 290 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 OR7E116P-201ENST00000448529 957 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC023245.1-201ENST00000468501 517 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ATP5LP5-201ENST00000483050 299 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC027369.2-201ENST00000528030 440 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 DPPA3P2-202ENST00000557188 1219 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 NMNAT1P5-201ENST00000559657 841 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC005244.1-201ENST00000582566 339 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 COX6CP7-201ENST00000597056 208 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC108673.3-201ENST00000609183 335 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC008833.1-201ENST00000611633 691 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AL589935.2-201ENST00000616471 1231 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CXADRP3-202ENST00000617265 1100 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CASC19-238ENST00000641523 1558 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 QRSL1P1-201ENST00000400977 1540 ntBASIC5.07□□□□□ -1.6
HLA-DPB1P04440 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DPB1P04440 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 NR1H5P-201ENST00000452683 1377 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC079097.1-201ENST00000512187 1399 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC104964.3-201ENST00000606115 2860 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 SELENOWP1-201ENST00000322792 252 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 RNA5SP433-201ENST00000364491 114 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GAPDHP75-201ENST00000433910 943 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms