Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.34□□□□□ -1.87
APOBP04114 MIR4737-201ENST00000583979 81 ntBASIC3.34□□□□□ -1.87
APOBP04114 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
APOBP04114 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
APOBP04114 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC3.34□□□□□ -1.88
APOBP04114 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
APOBP04114 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC3.34□□□□□ -1.88
APOBP04114 RAD17P2-201ENST00000451754 1977 ntBASIC3.34□□□□□ -1.88
APOBP04114 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.34□□□□□ -1.88
APOBP04114 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC3.34□□□□□ -1.88
APOBP04114 AC232271.1-201ENST00000602455 2715 ntBASIC3.34□□□□□ -1.88
APOBP04114 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC3.34□□□□□ -1.88
APOBP04114 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
APOBP04114 AL049693.1-201ENST00000402760 611 ntBASIC3.34□□□□□ -1.88
APOBP04114 USP24P1-201ENST00000433802 779 ntBASIC3.34□□□□□ -1.88
APOBP04114 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.34□□□□□ -1.88
APOBP04114 AC063943.1-201ENST00000465434 453 ntBASIC3.34□□□□□ -1.88
APOBP04114 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.34□□□□□ -1.88
APOBP04114 FTH1P8-201ENST00000498161 514 ntBASIC3.34□□□□□ -1.88
APOBP04114 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.34□□□□□ -1.88
APOBP04114 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.34□□□□□ -1.88
APOBP04114 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.34□□□□□ -1.88
APOBP04114 AC053481.3-201ENST00000577881 843 ntBASIC3.34□□□□□ -1.88
APOBP04114 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC3.34□□□□□ -1.88
APOBP04114 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
APOBP04114 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
APOBP04114 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 OR8B9P-202ENST00000642028 5216 ntBASIC3.33□□□□□ -1.88
APOBP04114 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
APOBP04114 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 RNA5SP455-201ENST00000365190 119 ntBASIC3.33□□□□□ -1.88
APOBP04114 SNORA57.1-201ENST00000391227 145 ntBASIC3.33□□□□□ -1.88
APOBP04114 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBP04114 GSTM5P1-201ENST00000434751 660 ntBASIC3.33□□□□□ -1.88
APOBP04114 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBP04114 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBP04114 AP001781.1-201ENST00000530977 207 ntBASIC3.33□□□□□ -1.88
APOBP04114 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBP04114 AC073575.2-201ENST00000614212 627 ntBASIC3.33□□□□□ -1.88
APOBP04114 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
APOBP04114 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBP04114 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 CCT8P1-201ENST00000413611 1657 ntBASIC3.33□□□□□ -1.88
APOBP04114 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 AC004074.1-201ENST00000421810 1063 ntBASIC3.33□□□□□ -1.88
APOBP04114 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 OR2B7P-201ENST00000429302 934 ntBASIC3.33□□□□□ -1.88
APOBP04114 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 AC109327.1-201ENST00000471666 403 ntBASIC3.33□□□□□ -1.88
APOBP04114 AC091912.1-201ENST00000511351 248 ntBASIC3.33□□□□□ -1.88
APOBP04114 RNA5SP43-201ENST00000516559 110 ntBASIC3.33□□□□□ -1.88
APOBP04114 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 MEMO1P5-201ENST00000604810 406 ntBASIC3.33□□□□□ -1.88
APOBP04114 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.33□□□□□ -1.88
APOBP04114 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 FBN2-201ENST00000262464 10724 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
APOBP04114 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBP04114 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBP04114 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 RPL32P23-201ENST00000397237 405 ntBASIC3.33□□□□□ -1.88
APOBP04114 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBP04114 AC007161.1-204ENST00000423039 460 ntBASIC3.33□□□□□ -1.88
APOBP04114 C4BPAP2-201ENST00000428434 478 ntBASIC3.33□□□□□ -1.88
APOBP04114 AL451136.1-201ENST00000435399 325 ntBASIC3.33□□□□□ -1.88
APOBP04114 YWHABP1-201ENST00000445359 727 ntBASIC3.33□□□□□ -1.88
APOBP04114 GAPDHP25-201ENST00000447061 1001 ntBASIC3.33□□□□□ -1.88
APOBP04114 AL162739.1-201ENST00000450606 307 ntBASIC3.33□□□□□ -1.88
APOBP04114 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBP04114 RPS17P5-201ENST00000498293 408 ntBASIC3.33□□□□□ -1.88
APOBP04114 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms