Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 AC126755.2-208ENST00000327792 462 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC138969.1-213ENST00000331436 462 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 AL035419.1-201ENST00000397037 564 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC019185.1-201ENST00000442718 389 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC026979.1-201ENST00000492525 396 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 RNU4ATAC-201ENST00000580972 127 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC105749.1-201ENST00000631338 2008 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 OR5W1P-201ENST00000423705 938 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 OR6D1P-201ENST00000436165 939 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 RPL7P45-201ENST00000455851 743 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC020898.1-201ENST00000474167 787 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 RPL37AP8-201ENST00000494116 276 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 SNRPCP2-201ENST00000504370 475 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC115837.1-201ENST00000517662 1001 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 PARP1P2-201ENST00000556806 195 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 BNIP3P11-201ENST00000603878 563 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.23□□□□□ -1.57
SPTA1P02549 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SPTA1P02549 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 AC144833.1-201ENST00000567953 4089 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 RN7SKP104-201ENST00000362605 328 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 SLC35E1P1-201ENST00000419313 864 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 C4BPAP2-201ENST00000428434 478 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 OR7A15P-201ENST00000449848 1009 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 RN7SL354P-201ENST00000469282 294 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC103987.1-201ENST00000473394 348 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.22□□□□□ -1.57
SPTA1P02549 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SPTA1P02549 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.22□□□□□ -1.57
SPTA1P02549 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 AC002090.1-201ENST00000625000 2138 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SPTA1P02549 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.22□□□□□ -1.57
SPTA1P02549 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.22□□□□□ -1.57
SPTA1P02549 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.22□□□□□ -1.57
SPTA1P02549 RPS15AP30-201ENST00000420976 390 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 AC012512.1-201ENST00000446594 718 ntBASIC5.22□□□□□ -1.57
SPTA1P02549 RN7SL459P-201ENST00000481078 302 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms