Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR937-201ENST00000401271 86 ntBASIC5.75□□□□□ -1.49
LDLRP01130 DHFRP5-201ENST00000406944 564 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.75□□□□□ -1.49
LDLRP01130 SUMO2P1-206ENST00000445436 284 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LDLRP01130 SBDSP1-204ENST00000453858 737 ntBASIC5.75□□□□□ -1.49
LDLRP01130 RPS26P39-201ENST00000469206 341 ntBASIC5.75□□□□□ -1.49
LDLRP01130 SEPT7P6-201ENST00000469999 1143 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AC098847.1-201ENST00000473094 348 ntBASIC5.75□□□□□ -1.49
LDLRP01130 RN7SL717P-201ENST00000478343 297 ntBASIC5.75□□□□□ -1.49
LDLRP01130 TRBV8-1-201ENST00000481590 279 ntBASIC5.75□□□□□ -1.49
LDLRP01130 OR52A4P-202ENST00000481634 799 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AC012123.2-201ENST00000485809 248 ntBASIC5.75□□□□□ -1.49
LDLRP01130 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.75□□□□□ -1.49
LDLRP01130 AC095052.1-201ENST00000509955 863 ntBASIC5.75□□□□□ -1.49
LDLRP01130 MTND2P31-201ENST00000512602 616 ntBASIC5.75□□□□□ -1.49
LDLRP01130 NPM1P21-201ENST00000513394 762 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AC021146.10-201ENST00000515628 706 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.75□□□□□ -1.49
LDLRP01130 AC007225.2-201ENST00000562529 256 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AC016839.1-201ENST00000578162 867 ntBASIC5.75□□□□□ -1.49
LDLRP01130 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.75□□□□□ -1.49
LDLRP01130 AL713998.2-201ENST00000604538 1198 ntBASIC5.75□□□□□ -1.49
LDLRP01130 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.75□□□□□ -1.49
LDLRP01130 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LDLRP01130 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 BCORP1-203ENST00000513194 5093 ntBASIC5.75□□□□□ -1.49
LDLRP01130 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LDLRP01130 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.75□□□□□ -1.49
LDLRP01130 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LDLRP01130 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
LDLRP01130 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LDLRP01130 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 U3.25-201ENST00000391209 220 ntBASIC5.74□□□□□ -1.49
LDLRP01130 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.74□□□□□ -1.49
LDLRP01130 AL161722.1-201ENST00000446972 1032 ntBASIC5.74□□□□□ -1.49
LDLRP01130 REG1CP-206ENST00000447469 496 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 RNU7-157P-201ENST00000459600 66 ntBASIC5.74□□□□□ -1.49
LDLRP01130 HMGN1P8-201ENST00000463578 288 ntBASIC5.74□□□□□ -1.49
LDLRP01130 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 SNRPCP3-201ENST00000474888 476 ntBASIC5.74□□□□□ -1.49
LDLRP01130 RPL12P31-201ENST00000478433 450 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 OR2A3P-201ENST00000493774 953 ntBASIC5.74□□□□□ -1.49
LDLRP01130 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 OR5H7P-201ENST00000514084 930 ntBASIC5.74□□□□□ -1.49
LDLRP01130 RNA5SP340-201ENST00000517132 107 ntBASIC5.74□□□□□ -1.49
LDLRP01130 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 AC025423.2-201ENST00000537570 439 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC006518.1-201ENST00000541449 943 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.74□□□□□ -1.49
LDLRP01130 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 AC007346.1-201ENST00000569208 867 ntBASIC5.74□□□□□ -1.49
LDLRP01130 MIR3176-201ENST00000582210 90 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 AP005136.2-201ENST00000583253 1049 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.74□□□□□ -1.49
LDLRP01130 AC060780.2-201ENST00000589047 198 ntBASIC5.74□□□□□ -1.49
LDLRP01130 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.74□□□□□ -1.49
LDLRP01130 OR7E18P-201ENST00000592589 702 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC245128.3-201ENST00000594721 748 ntBASIC5.74□□□□□ -1.49
LDLRP01130 BNIP3P32-201ENST00000600015 554 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AC073046.2-201ENST00000604756 527 ntBASIC5.74□□□□□ -1.49
LDLRP01130 SNORA74.4-201ENST00000607595 199 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AL354696.1-201ENST00000614652 497 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AL137067.2-201ENST00000621202 131 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AL049767.1-202ENST00000637826 242 ntBASIC5.74□□□□□ -1.49
LDLRP01130 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 CASC19-238ENST00000641523 1558 ntBASIC5.74□□□□□ -1.49
LDLRP01130 AL161756.3-201ENST00000641216 2071 ntBASIC5.74□□□□□ -1.49
LDLRP01130 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
LDLRP01130 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LDLRP01130 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
LDLRP01130 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LDLRP01130 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms