Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MTCO1P1-201ENST00000624263 1081 ntBASIC8.55□□□□□ -1.04
RAPGEF3O95398 AC020978.9-201ENST00000624380 1141 ntBASIC8.55□□□□□ -1.04
RAPGEF3O95398 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
RAPGEF3O95398 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RAPGEF3O95398 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RAPGEF3O95398 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RAPGEF3O95398 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.55□□□□□ -1.04
RAPGEF3O95398 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
RAPGEF3O95398 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
RAPGEF3O95398 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.55□□□□□ -1.04
RAPGEF3O95398 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AC008957.3-201ENST00000624112 2242 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 SNORA67-201ENST00000384423 137 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 MTND2P39-201ENST00000457230 764 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 AP001960.1-201ENST00000506494 658 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 RBM22P1-201ENST00000578589 1214 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 AL163152.1-201ENST00000642001 374 ntBASIC8.54□□□□□ -1.04
RAPGEF3O95398 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
RAPGEF3O95398 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC8.54□□□□□ -1.04
RAPGEF3O95398 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 RNU2-72P-201ENST00000411175 163 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 RPS6P23-201ENST00000413224 722 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 FAM96AP1-201ENST00000430879 482 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC092647.3-201ENST00000443044 633 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AL603882.1-201ENST00000463059 681 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC092905.1-201ENST00000467527 949 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 RN7SL205P-201ENST00000490174 284 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 MORF4L2P1-201ENST00000503761 858 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC074255.1-201ENST00000511259 501 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC127381.1-201ENST00000555979 939 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 RN7SL52P-201ENST00000584271 284 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 RN7SL722P-201ENST00000617780 284 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 RN7SL565P-201ENST00000618246 284 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AL353662.3-201ENST00000625131 237 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 AC073869.10-201ENST00000642016 354 ntBASIC8.53□□□□□ -1.04
RAPGEF3O95398 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
RAPGEF3O95398 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.53□□□□□ -1.04
RAPGEF3O95398 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.52□□□□□ -1.04
RAPGEF3O95398 AC062029.1-202ENST00000606164 3651 ntBASIC8.52□□□□□ -1.04
RAPGEF3O95398 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC010132.2-201ENST00000295493 1043 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 RNA5SP123-201ENST00000363244 119 ntBASIC8.52□□□□□ -1.05
RAPGEF3O95398 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC8.52□□□□□ -1.05
RAPGEF3O95398 HSFY1P1-201ENST00000423928 1178 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms