Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 IGKV1D-32-201ENST00000517449 318 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 AC124891.1-201ENST00000536322 519 ntBASIC5.54□□□□□ -1.52
SNX3O60493 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX3O60493 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 AC127381.1-201ENST00000555979 939 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 MIR4472-2-201ENST00000582069 67 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 MIR3936-201ENST00000584304 110 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 AL365181.4-201ENST00000609800 547 ntBASIC5.54□□□□□ -1.52
SNX3O60493 RFPL4AP6-201ENST00000616792 846 ntBASIC5.54□□□□□ -1.52
SNX3O60493 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 AP003108.4-201ENST00000623917 878 ntBASIC5.54□□□□□ -1.52
SNX3O60493 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX3O60493 AP000550.3-201ENST00000637734 379 ntBASIC5.54□□□□□ -1.52
SNX3O60493 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX3O60493 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX3O60493 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 AC104623.2-202ENST00000623477 4002 ntBASIC5.53□□□□□ -1.52
SNX3O60493 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 NPM1P10-201ENST00000398310 865 ntBASIC5.53□□□□□ -1.52
SNX3O60493 RPL21P67-201ENST00000402896 478 ntBASIC5.53□□□□□ -1.52
SNX3O60493 DHFRP5-201ENST00000406944 564 ntBASIC5.53□□□□□ -1.52
SNX3O60493 RPL12P9-201ENST00000412942 488 ntBASIC5.53□□□□□ -1.52
SNX3O60493 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 RPL7P56-201ENST00000429441 717 ntBASIC5.53□□□□□ -1.52
SNX3O60493 DEFA9P-201ENST00000433042 285 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AC239800.1-201ENST00000442049 719 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 BMS1P10-201ENST00000443754 1120 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 IGBP1P3-201ENST00000447449 1000 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AL445466.1-201ENST00000448432 357 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 AL356390.1-201ENST00000455684 397 ntBASIC5.53□□□□□ -1.52
SNX3O60493 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX3O60493 AP000797.2-201ENST00000475768 606 ntBASIC5.53□□□□□ -1.52
SNX3O60493 RN7SL655P-201ENST00000486087 298 ntBASIC5.53□□□□□ -1.52
SNX3O60493 RPL5P33-201ENST00000487833 905 ntBASIC5.53□□□□□ -1.52
SNX3O60493 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 AC009567.2-201ENST00000502989 349 ntBASIC5.53□□□□□ -1.52
SNX3O60493 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 IMPA1P1-201ENST00000510718 842 ntBASIC5.53□□□□□ -1.52
SNX3O60493 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.53□□□□□ -1.52
SNX3O60493 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 AC004232.2-201ENST00000574245 821 ntBASIC5.53□□□□□ -1.52
SNX3O60493 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
SNX3O60493 AC103703.1-201ENST00000634783 663 ntBASIC5.53□□□□□ -1.52
SNX3O60493 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 CUL4AP1-201ENST00000514750 1863 ntBASIC5.53□□□□□ -1.52
SNX3O60493 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 MTCO1P28-201ENST00000574177 1528 ntBASIC5.53□□□□□ -1.52
SNX3O60493 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SNX3O60493 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SNX3O60493 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
SNX3O60493 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.52□□□□□ -1.53
SNX3O60493 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
SNX3O60493 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SNX3O60493 RNA5SP110-201ENST00000362638 115 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC083799.1-201ENST00000366451 910 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC092634.1-201ENST00000366505 199 ntBASIC5.52□□□□□ -1.53
SNX3O60493 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 SNORD94-201ENST00000386037 137 ntBASIC5.52□□□□□ -1.53
SNX3O60493 RNU6-316P-201ENST00000391027 107 ntBASIC5.52□□□□□ -1.53
SNX3O60493 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX3O60493 DPPA2P2-201ENST00000418220 897 ntBASIC5.52□□□□□ -1.53
SNX3O60493 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.52□□□□□ -1.53
SNX3O60493 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SNX3O60493 AP003385.1-201ENST00000426387 893 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms