Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.248-201ENST00000364501 109 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX1O00570 SNORA40.2-201ENST00000390847 128 ntBASIC7.34□□□□□ -1.23
SOX1O00570 DEFB108C-201ENST00000400154 252 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AL391361.1-201ENST00000405580 489 ntBASIC7.34□□□□□ -1.23
SOX1O00570 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 RNU4-74P-201ENST00000411280 161 ntBASIC7.34□□□□□ -1.23
SOX1O00570 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX1O00570 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX1O00570 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 AL596276.1-201ENST00000434465 418 ntBASIC7.34□□□□□ -1.23
SOX1O00570 RAB9AP5-201ENST00000437794 597 ntBASIC7.34□□□□□ -1.23
SOX1O00570 RAB9AP2-201ENST00000443911 597 ntBASIC7.34□□□□□ -1.23
SOX1O00570 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX1O00570 OR51P1P-201ENST00000447547 942 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 AC107015.1-201ENST00000466902 747 ntBASIC7.34□□□□□ -1.23
SOX1O00570 RN7SL216P-201ENST00000471607 298 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC104763.1-201ENST00000475274 360 ntBASIC7.34□□□□□ -1.23
SOX1O00570 RN7SL379P-201ENST00000479912 293 ntBASIC7.34□□□□□ -1.23
SOX1O00570 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 AC022296.2-201ENST00000512424 202 ntBASIC7.34□□□□□ -1.23
SOX1O00570 ATP5LP3-201ENST00000514223 304 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 RN7SKP2-201ENST00000517003 319 ntBASIC7.34□□□□□ -1.23
SOX1O00570 MTCYBP19-201ENST00000517463 1124 ntBASIC7.34□□□□□ -1.23
SOX1O00570 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
SOX1O00570 AC109635.3-201ENST00000529536 185 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 UBE2NP1-201ENST00000545592 458 ntBASIC7.34□□□□□ -1.23
SOX1O00570 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 AC010547.7-201ENST00000570323 333 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 MIR4437-201ENST00000581331 60 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX1O00570 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.34□□□□□ -1.23
SOX1O00570 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.34□□□□□ -1.23
SOX1O00570 AL590032.1-201ENST00000604920 252 ntBASIC7.34□□□□□ -1.23
SOX1O00570 SNORD96A-201ENST00000606577 79 ntBASIC7.34□□□□□ -1.23
SOX1O00570 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 AC126118.1-201ENST00000607744 628 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AP005431.1-201ENST00000618479 319 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC008443.7-201ENST00000622195 246 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AC010480.1-201ENST00000624823 684 ntBASIC7.34□□□□□ -1.23
SOX1O00570 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SOX1O00570 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
SOX1O00570 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.34□□□□□ -1.24
SOX1O00570 AL078595.2-201ENST00000605309 1780 ntBASIC7.33□□□□□ -1.24
SOX1O00570 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.33□□□□□ -1.24
SOX1O00570 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 AC009831.5-201ENST00000624000 3189 ntBASIC7.33□□□□□ -1.24
SOX1O00570 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SOX1O00570 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 EIF3EP1-201ENST00000433978 1316 ntBASIC7.33□□□□□ -1.24
SOX1O00570 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SOX1O00570 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SOX1O00570 RNA5SP321-201ENST00000362722 111 ntBASIC7.33□□□□□ -1.24
SOX1O00570 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SOX1O00570 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.33□□□□□ -1.24
SOX1O00570 SNORD65-201ENST00000391079 73 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AL139806.1-201ENST00000403057 1002 ntBASIC7.33□□□□□ -1.24
SOX1O00570 RNU6-920P-201ENST00000410926 92 ntBASIC7.33□□□□□ -1.24
SOX1O00570 CDK8P2-201ENST00000415020 547 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AL513325.1-201ENST00000417716 1034 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 CXCR2P1-202ENST00000443392 1074 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC010240.2-201ENST00000445363 1205 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.33□□□□□ -1.24
SOX1O00570 FTH1P2-201ENST00000466086 412 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SOX1O00570 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.33□□□□□ -1.24
SOX1O00570 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.33□□□□□ -1.24
SOX1O00570 SNRPCP6-201ENST00000528310 210 ntBASIC7.33□□□□□ -1.24
SOX1O00570 EIF4A2P5-201ENST00000529914 499 ntBASIC7.33□□□□□ -1.24
SOX1O00570 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms