Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL391597.1-201ENST00000618707 694 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AC048341.3-201ENST00000619323 491 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 FAM27E2-201ENST00000619668 403 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC092376.2-201ENST00000622621 4116 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 AC093909.5-201ENST00000621839 1799 ntBASIC5.93□□□□□ -1.46
CCDC188H7C350 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC188H7C350 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC188H7C350 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC188H7C350 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC188H7C350 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC188H7C350 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC188H7C350 U3.7-201ENST00000363668 216 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 AC092865.3-201ENST00000425390 1026 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AC099782.1-201ENST00000425889 474 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 GAPDHP75-201ENST00000433910 943 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 NANOGP9-201ENST00000439890 892 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AC073465.2-201ENST00000440938 498 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 NXT1P1-201ENST00000458481 316 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC188H7C350 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC188H7C350 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 RFPL4AP3-201ENST00000515267 345 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 AC079064.1-201ENST00000528365 362 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 MTATP6P25-201ENST00000574491 261 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 MIR4660-201ENST00000583549 74 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AC092681.3-201ENST00000609463 678 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 AC117490.2-201ENST00000610042 594 ntBASIC5.92□□□□□ -1.46
CCDC188H7C350 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC188H7C350 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.92□□□□□ -1.46
CCDC188H7C350 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC188H7C350 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CCDC188H7C350 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC188H7C350 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC188H7C350 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 Z83820.1-201ENST00000456978 1499 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC188H7C350 RIMKLBP2-201ENST00000424737 654 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AL022324.2-201ENST00000434827 780 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 C1DP3-201ENST00000455013 423 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 MRPL57P6-201ENST00000506570 309 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AC108103.1-201ENST00000511286 446 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 GAPDHP71-201ENST00000511530 1003 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 MRPS5P3-201ENST00000515577 166 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 RN7SKP253-201ENST00000516424 309 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 PMS2P3-207ENST00000529061 717 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC188H7C350 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 AC096996.1-201ENST00000563813 325 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AC007346.1-201ENST00000569208 867 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 AC091167.5-201ENST00000605689 894 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 AL356608.1-201ENST00000610034 820 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 MIR6885-201ENST00000612241 66 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC188H7C350 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 AC008627.1-201ENST00000517511 1704 ntBASIC5.91□□□□□ -1.46
CCDC188H7C350 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC188H7C350 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC188H7C350 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC188H7C350 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC188H7C350 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC188H7C350 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms