Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC006600.2-201ENST00000624834 2506 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP453-201ENST00000362503 119 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 ARAFP1-201ENST00000422172 605 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 NPM1P26-201ENST00000426339 738 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 RAB9AP5-201ENST00000437794 597 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 RAB9AP2-201ENST00000443911 597 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC005077.1-201ENST00000449226 375 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC128716.1-201ENST00000475129 166 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC044810.1-201ENST00000480271 711 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC016687.1-201ENST00000482574 353 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC091874.2-201ENST00000505889 720 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AP003102.1-201ENST00000525638 661 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SL230P-201ENST00000580835 303 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC005244.1-201ENST00000582566 339 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AL137918.1-201ENST00000624542 1922 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 AF287957.1-201ENST00000607368 1595 ntBASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TCRBV7S3A2A0A539 HSPD1P9-201ENST00000420325 1636 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SNORD51.1-201ENST00000365405 77 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 RNU1-136P-201ENST00000384181 164 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SKP86-201ENST00000410454 332 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SKP29-201ENST00000410957 272 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC009963.4-201ENST00000448535 339 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 DUTP1-201ENST00000493631 470 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 RNA5SP340-201ENST00000517132 107 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 MIR5010-201ENST00000582846 120 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL355802.4-201ENST00000607635 548 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC108673.3-201ENST00000609183 335 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 DDX6P1-205ENST00000441966 1436 ntBASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
TCRBV7S3A2A0A539 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms