Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 GAPDHP15-201ENST00000398586 975 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 MIR1275-201ENST00000408770 80 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RPL35AP3-201ENST00000414680 288 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AL158827.1-201ENST00000416300 391 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RPS4XP5-201ENST00000419038 768 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AL445928.1-201ENST00000435545 222 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RPL6P30-201ENST00000443382 862 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC092865.4-201ENST00000477936 615 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC079080.1-201ENST00000479841 822 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 HSD3BP3-201ENST00000514706 994 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AL163952.1-202ENST00000569625 600 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC091167.5-201ENST00000605689 894 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AL445670.1-201ENST00000618889 801 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 AC006840.1-201ENST00000623069 542 ntBASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RHBDD3Q9Y3P4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC083899.1-201ENST00000454465 3819 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 SELENOWP1-201ENST00000322792 252 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 RNA5SP91-201ENST00000390902 119 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 CRIP1P1-201ENST00000427567 185 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 PNKDP1-201ENST00000435914 430 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 BMS1P10-201ENST00000443754 1120 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC073072.2-201ENST00000447425 348 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC093166.3-201ENST00000448785 303 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 OR52Y1P-201ENST00000452418 828 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC104339.1-201ENST00000465478 348 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AL117692.1-201ENST00000494283 713 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 RN7SKP238-201ENST00000516483 249 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 DUX4L52-201ENST00000549363 777 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 GARSP1-201ENST00000570895 719 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 TXNP4-201ENST00000575018 310 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC010487.1-201ENST00000594408 1172 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AC092266.1-201ENST00000610958 165 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 MIR6889-201ENST00000613185 59 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AL136228.1-201ENST00000622221 319 ntBASIC5.07□□□□□ -1.6
RHBDD3Q9Y3P4 AL683826.1-201ENST00000624104 627 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms