Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 AC109309.2-201ENST00000612597 332 ntBASIC5.87□□□□□ -1.47
SPASTQ9UBP0 AP005431.1-201ENST00000618479 319 ntBASIC5.87□□□□□ -1.47
SPASTQ9UBP0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 MSL3P1-202ENST00000440028 1468 ntBASIC5.87□□□□□ -1.47
SPASTQ9UBP0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 AC011503.2-201ENST00000594230 1500 ntBASIC5.87□□□□□ -1.47
SPASTQ9UBP0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SPASTQ9UBP0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 OR13C1P-202ENST00000641378 2919 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 REG1CP-206ENST00000447469 496 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 MTND6P5-201ENST00000448266 512 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 YWHAEP1-201ENST00000453697 763 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AL445687.2-201ENST00000458156 728 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC104164.1-201ENST00000460282 590 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC124945.1-201ENST00000485133 188 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 CYCSP22-201ENST00000517555 339 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC006530.1-201ENST00000555980 571 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC119403.2-201ENST00000590960 598 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 MIR6886-201ENST00000619864 61 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC087821.1-201ENST00000623639 567 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AP001153.1-201ENST00000641024 338 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 AC083837.1-201ENST00000565297 2994 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 Z95114.1-201ENST00000624264 14574 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SPASTQ9UBP0 PARP4P2-201ENST00000446672 3326 ntBASIC5.86□□□□□ -1.47
SPASTQ9UBP0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AL121839.2-201ENST00000565058 6943 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RNA5SP242-201ENST00000364171 118 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RN7SKP186-201ENST00000365371 303 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RN7SKP293-201ENST00000411389 296 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AL356968.2-201ENST00000412769 1257 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RPL34P3-201ENST00000421454 338 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AC079355.1-201ENST00000421770 223 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 PRUNEP1-201ENST00000425846 705 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 MTCO3P17-201ENST00000443775 513 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 RPS27AP2-201ENST00000457576 465 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AC023141.9-201ENST00000458734 412 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.85□□□□□ -1.47
SPASTQ9UBP0 AC099521.1-201ENST00000482557 334 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms