Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC022400.9-201ENST00000623633 273 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL355377.1-201ENST00000621125 1653 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AC009120.2-204ENST00000621548 2032 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 MAPK10-287ENST00000641217 3037 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
LRFN1Q9P244 AL591848.4-201ENST00000567832 3472 ntBASIC5.87□□□□□ -1.47
LRFN1Q9P244 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LRFN1Q9P244 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 ZNF402P-201ENST00000404435 3100 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC117409.1-201ENST00000470499 1310 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 OR2M1P-201ENST00000318104 951 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RNU4-31P-201ENST00000384211 141 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AL096711.1-201ENST00000404780 554 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AL023284.3-201ENST00000407767 334 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC069154.1-201ENST00000432914 542 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC007679.3-201ENST00000434035 414 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 OR13K1P-201ENST00000444577 975 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC069540.1-201ENST00000446320 988 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RPS20P4-201ENST00000461659 355 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 RN7SL369P-201ENST00000477138 299 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 RPL34P33-201ENST00000486062 334 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 SNX18P24-201ENST00000505249 671 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 NAMPTP2-201ENST00000505629 1115 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RNU6-1004P-201ENST00000516584 111 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 RNA5SP206-201ENST00000516703 121 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 IGHV4-55-201ENST00000520889 368 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RN7SL475P-201ENST00000583379 298 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC124916.2-201ENST00000604416 224 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC097504.2-201ENST00000608088 454 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC021851.1-201ENST00000608537 1082 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AP005229.2-201ENST00000609980 697 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 MIR6862-1-201ENST00000613016 70 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 MIR6862-2-201ENST00000614755 70 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AP004607.9-201ENST00000618202 316 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AL132640.3-201ENST00000630473 177 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AP000550.3-201ENST00000637734 379 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 OR7E91P-202ENST00000642062 1198 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC008691.1-209ENST00000642094 814 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 OLMALINC-203ENST00000641087 3779 ntBASIC5.86□□□□□ -1.47
LRFN1Q9P244 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.86□□□□□ -1.47
LRFN1Q9P244 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LRFN1Q9P244 AC105114.1-201ENST00000624795 1862 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms