Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MR1-205ENST00000434571 7479 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 RNU6-28P-201ENST00000362378 107 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 RNU6-534P-201ENST00000364877 106 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 SPINK4-202ENST00000379725 533 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 MTND3P17-201ENST00000416968 344 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 ZNF90P2-204ENST00000419323 1075 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC104698.1-201ENST00000435671 276 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC008267.4-201ENST00000442005 521 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL008627.1-201ENST00000446953 486 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC023141.2-201ENST00000449138 550 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC132479.1-201ENST00000449160 144 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 TCEA1P1-201ENST00000449716 880 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 HMGB1P15-201ENST00000453854 435 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 RPL7P15-201ENST00000461190 712 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 UBFD1P1-201ENST00000473259 814 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AK4P2-201ENST00000504372 670 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC022616.6-201ENST00000520479 119 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 RRP8-205ENST00000534343 726 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC007406.2-201ENST00000540868 503 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC104770.1-202ENST00000573698 325 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AP001005.2-201ENST00000575066 763 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC008945.2-201ENST00000606056 604 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 BX664608.1-201ENST00000610519 487 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AL020991.1-201ENST00000612314 373 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC067904.3-201ENST00000617126 261 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC141557.2-201ENST00000621330 482 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 AC138915.3-201ENST00000562908 1389 ntBASIC9.82□□□□□ -0.84
RTN4Q9NQC3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
RTN4Q9NQC3 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ERCC6-202ENST00000374127 1782 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ST3GAL3-203ENST00000332628 1035 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RNU6-853P-201ENST00000364306 107 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 ST3GAL3-218ENST00000372372 1242 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 MT-TL1-201ENST00000386347 75 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RPL23AP32-201ENST00000395315 459 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AL049693.1-201ENST00000402760 611 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AL137784.1-201ENST00000407121 745 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 LSM5-202ENST00000409292 538 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 SLC25A26-203ENST00000413054 1096 ntTSL 5 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC018638.1-201ENST00000414464 330 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC083822.1-201ENST00000438001 201 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AL121748.2-201ENST00000451530 781 ntTSL 2 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AP000852.1-201ENST00000472460 573 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RN7SL748P-201ENST00000483066 311 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RPL23AP41-201ENST00000484754 458 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RN7SL384P-201ENST00000490382 298 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 RPL30P11-201ENST00000495304 339 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 NPM1P27-201ENST00000502784 830 ntBASIC9.81□□□□□ -0.84
RTN4Q9NQC3 AC021106.2-201ENST00000505310 710 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms