Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.15□□□□□ -0.95
IFT140Q96RY7 AL627230.1-201ENST00000613077 211 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 AC073575.2-201ENST00000614212 627 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 MIR6780A-201ENST00000615089 68 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 AL591926.8-201ENST00000616876 211 ntBASIC9.15□□□□□ -0.95
IFT140Q96RY7 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
IFT140Q96RY7 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 OR2AM1P-201ENST00000422137 422 ntBASIC9.14□□□□□ -0.95
IFT140Q96RY7 RHOT1P3-201ENST00000436571 331 ntBASIC9.14□□□□□ -0.95
IFT140Q96RY7 MTCYBP21-201ENST00000443300 1113 ntBASIC9.14□□□□□ -0.95
IFT140Q96RY7 NDUFA12P1-201ENST00000455914 406 ntBASIC9.14□□□□□ -0.95
IFT140Q96RY7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 AC021006.3-201ENST00000530771 192 ntBASIC9.14□□□□□ -0.95
IFT140Q96RY7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.14□□□□□ -0.95
IFT140Q96RY7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
IFT140Q96RY7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 AC097484.1-201ENST00000471148 389 ntBASIC9.13□□□□□ -0.95
IFT140Q96RY7 RPS4XP20-201ENST00000505751 772 ntBASIC9.13□□□□□ -0.95
IFT140Q96RY7 AC134349.2-201ENST00000535136 910 ntBASIC9.13□□□□□ -0.95
IFT140Q96RY7 AC007346.2-201ENST00000564816 892 ntBASIC9.13□□□□□ -0.95
IFT140Q96RY7 AC020910.2-201ENST00000603635 610 ntBASIC9.13□□□□□ -0.95
IFT140Q96RY7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
IFT140Q96RY7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 AP004607.3-201ENST00000530354 3915 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 RNU1-146P-201ENST00000364015 165 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 AL451063.1-201ENST00000450164 1133 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 snoU13.20-201ENST00000459180 104 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 SCARNA16.4-201ENST00000516956 187 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 MIR4691-201ENST00000583764 85 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 AL031320.1-201ENST00000604177 357 ntBASIC9.12□□□□□ -0.95
IFT140Q96RY7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
IFT140Q96RY7 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.12□□□□□ -0.95
IFT140Q96RY7 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC119751.6-201ENST00000416712 186 ntBASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC007537.2-201ENST00000472093 511 ntBASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC008033.2-201ENST00000542626 177 ntBASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
IFT140Q96RY7 RMST-210ENST00000640149 2844 ntTSL 5 BASIC9.11□□□□□ -0.95
IFT140Q96RY7 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AC127070.3-201ENST00000503695 3263 ntBASIC9.1□□□□□ -0.95
IFT140Q96RY7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms