Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RNA5SP279-201ENST00000365513 117 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 GCNT1P4-201ENST00000404096 329 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL021407.1-201ENST00000404531 386 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL663061.1-201ENST00000416625 580 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL365203.2-201ENST00000423444 196 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RPL12P12-201ENST00000424633 501 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 GAPDHP59-201ENST00000435908 267 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL589880.1-201ENST00000448271 287 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 MYO5BP2-201ENST00000449815 1277 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 NDUFAF4P4-201ENST00000454883 502 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RN7SL39P-201ENST00000462264 297 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RPL6P9-201ENST00000466502 859 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 STRADBP1-201ENST00000478954 1281 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC116353.3-201ENST00000511215 249 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 HSD3BP3-201ENST00000514706 994 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC006512.2-201ENST00000543250 486 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL354943.1-201ENST00000572103 781 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL078601.3-201ENST00000573303 535 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RN7SL270P-201ENST00000579643 281 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC022069.1-201ENST00000582910 658 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC020765.1-201ENST00000604296 328 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 DPRXP5-201ENST00000604662 539 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC009163.6-201ENST00000612367 342 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AL121890.3-201ENST00000618494 516 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 AC009237.3-203ENST00000442128 3551 ntBASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNGAP1Q96PV0 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
SYNGAP1Q96PV0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.2
SYNGAP1Q96PV0 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RACGAP1P-201ENST00000550663 1879 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RPL12P13-201ENST00000310055 497 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 SNORA38B-201ENST00000363524 131 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RNU1-84P-201ENST00000365447 164 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 OR13C3-201ENST00000374781 1108 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 Y_RNA.559-201ENST00000384686 107 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RPS3AP26-201ENST00000398259 784 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 RN7SKP271-201ENST00000410528 320 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 UBE2V1P10-201ENST00000414685 269 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 MTND4P20-201ENST00000424125 869 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC021876.1-201ENST00000425959 359 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AL353572.1-201ENST00000442490 417 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 CUBNP2-201ENST00000443534 1139 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC068135.1-201ENST00000446164 246 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 HMGB1P3-201ENST00000502802 616 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC105420.1-201ENST00000504389 582 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC093770.1-201ENST00000511559 571 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC008549.1-201ENST00000512900 643 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 MTATP6P1-201ENST00000514057 681 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 AC008429.4-201ENST00000521201 182 ntBASIC7.58□□□□□ -1.2
SYNGAP1Q96PV0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 154.7 ms