Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 RNU1-134P-201ENST00000362935 165 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AL096800.1-201ENST00000405326 893 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 HLA-DPA3-207ENST00000454398 229 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AP001858.2-201ENST00000536213 601 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC008147.3-201ENST00000548666 354 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC027176.2-201ENST00000559166 746 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 MIR4701-201ENST00000583094 63 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AC004890.3-201ENST00000605566 1095 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AL355802.4-201ENST00000607635 548 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 AL592494.2-201ENST00000425455 1548 ntBASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CHMP4CQ96CF2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AP005435.3-201ENST00000531260 3198 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 NPM1P38-201ENST00000403835 865 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 RPS26P38-201ENST00000414476 348 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 UBE2V1P6-201ENST00000430840 422 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SCAND3P1-201ENST00000439854 1060 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 GAPDHP23-201ENST00000444823 993 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC112187.1-201ENST00000455837 479 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC068228.1-201ENST00000461723 211 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SLC25A51P1-201ENST00000468432 871 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 RPL23AP40-201ENST00000487630 390 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC104629.1-201ENST00000494226 508 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC027338.1-201ENST00000514840 825 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC020916.2-201ENST00000591242 360 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC105148.1-201ENST00000604961 409 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AL031658.2-201ENST00000616850 651 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AC079298.2-201ENST00000623885 459 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AP001962.1-201ENST00000624114 559 ntBASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.25□□□□□ -1.25
CHMP4CQ96CF2 ICE2P1-201ENST00000512800 1849 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC083899.2-201ENST00000423285 1376 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 AC110792.3-201ENST00000595906 1614 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 SNORD115-48-201ENST00000364764 76 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 RNU6-40P-201ENST00000384254 107 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 RNA5SP122-201ENST00000384457 108 ntBASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CHMP4CQ96CF2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms