Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RNA5SP156-201ENST00000410250 110 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 AC069282.1-201ENST00000411911 526 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC092570.3-201ENST00000420113 693 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 MORF4L1P7-201ENST00000426038 703 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC007383.1-201ENST00000445875 636 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 TIMM8BP2-201ENST00000445940 251 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.72□□□□□ -1.33
HPS3Q969F9 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 PPIAP7-201ENST00000454070 489 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AL355032.1-201ENST00000472981 438 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 RN7SL362P-201ENST00000494228 267 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.72□□□□□ -1.33
HPS3Q969F9 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC018797.1-201ENST00000510791 255 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 RNA5SP473-201ENST00000516402 125 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AP000620.1-201ENST00000527147 504 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 NOP56P3-201ENST00000549457 385 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 AC005156.1-201ENST00000613371 573 ntBASIC6.72□□□□□ -1.33
HPS3Q969F9 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HPS3Q969F9 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.72□□□□□ -1.33
HPS3Q969F9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HPS3Q969F9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.33
HPS3Q969F9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
HPS3Q969F9 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HPS3Q969F9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
HPS3Q969F9 AL354854.1-201ENST00000455940 1363 ntBASIC6.71□□□□□ -1.33
HPS3Q969F9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
HPS3Q969F9 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
HPS3Q969F9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HPS3Q969F9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HPS3Q969F9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 UGT2B24P-201ENST00000514441 1597 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 RAD1P1-201ENST00000231383 813 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 GSTA12P-201ENST00000402398 508 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 MIR1275-201ENST00000408770 80 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 RN7SKP86-201ENST00000410454 332 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 VN1R37P-201ENST00000419096 748 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 RPL7AP14-201ENST00000424041 802 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 EEF1B2P3-201ENST00000447718 678 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC002553.3-201ENST00000453002 341 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AC118758.1-202ENST00000454719 225 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 RPL7L1P3-201ENST00000455249 689 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC114728.1-201ENST00000488289 483 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AP002453.1-201ENST00000492327 668 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 MAST4-IT1-201ENST00000514241 658 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HPS3Q969F9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC093014.1-201ENST00000548926 724 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AC007346.1-201ENST00000569208 867 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 AC016597.2-201ENST00000613256 341 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AC007683.2-201ENST00000624681 714 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AL357562.1-201ENST00000624911 609 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 AP001002.2-201ENST00000625137 386 ntBASIC6.71□□□□□ -1.34
HPS3Q969F9 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.71□□□□□ -1.34
HPS3Q969F9 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.71□□□□□ -1.34
HPS3Q969F9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HPS3Q969F9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms