Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC019072.1-201ENST00000604535 1551 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 RNU105B-201ENST00000364478 208 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 RN7SKP146-201ENST00000410242 334 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 RN7SKP166-201ENST00000410812 305 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 GNG5P5-201ENST00000420444 220 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC094019.1-201ENST00000434678 472 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 KRT8P51-201ENST00000438938 274 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 RN7SL72P-201ENST00000460697 269 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC093719.1-201ENST00000480427 441 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 RPL34P33-201ENST00000486062 334 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 RNA5SP434-201ENST00000516647 121 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC078878.1-201ENST00000539832 958 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 MT1CP-201ENST00000567054 174 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 ARGFXP2-201ENST00000579304 949 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC034236.3-201ENST00000605999 461 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC023813.4-201ENST00000607580 580 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC015819.1-201ENST00000613588 663 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AL356274.1-201ENST00000617064 410 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AP001005.3-201ENST00000622049 129 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC138965.3-201ENST00000623875 498 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC021106.3-201ENST00000623925 531 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC119674.1-220ENST00000641502 1048 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 CASC19-246ENST00000641625 1606 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 AC133552.1-201ENST00000569988 4007 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.43□□□□□ -1.54
PTP4A1Q93096 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC012254.3-201ENST00000591183 2117 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 RNA5SP77-201ENST00000365394 120 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 SNORA5.1-201ENST00000384275 131 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AL121878.1-201ENST00000418638 859 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 RPS15AP30-201ENST00000420976 390 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 OSTCP4-201ENST00000424397 449 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTP4A1Q93096 BX276092.6-201ENST00000430476 250 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 MTCO1P57-201ENST00000432182 261 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC013403.1-201ENST00000436954 263 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 CALM1P2-201ENST00000452941 448 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 BX276092.8-201ENST00000455722 250 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 ACA64.4-201ENST00000459070 127 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 EIF2S2P4-201ENST00000461070 984 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 RN7SL836P-201ENST00000476140 296 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 RPS27P20-201ENST00000492051 246 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 PCNAP1-201ENST00000505363 709 ntBASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.42□□□□□ -1.54
PTP4A1Q93096 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms