Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CFAP43Q8NDM7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CFAP43Q8NDM7 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 HSPD1P7-201ENST00000447985 1686 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AL359195.2-201ENST00000623657 4412 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC010132.2-201ENST00000295493 1043 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 RPL23AP18-201ENST00000416139 468 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC245028.1-201ENST00000423259 256 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC104837.2-201ENST00000427236 424 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC079080.1-201ENST00000479841 822 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 PCNPP1-201ENST00000552501 511 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 DHFRP1-201ENST00000579682 559 ntBASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CFAP43Q8NDM7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 VN1R21P-201ENST00000426703 765 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC232271.1-201ENST00000602455 2715 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC022164.1-201ENST00000568767 2673 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 TMEM183AP1-205ENST00000432739 290 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 CEACAMP9-201ENST00000442990 513 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC078899.1-201ENST00000521432 1185 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC078878.1-201ENST00000539832 958 ntBASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC8.69□□□□□ -1.02
CFAP43Q8NDM7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 SNORA16A-201ENST00000384342 137 ntBASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 RPL23AP17-201ENST00000401064 499 ntBASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 BRD9P1-201ENST00000529855 560 ntBASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 WBP1LP8-201ENST00000617401 327 ntBASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
CFAP43Q8NDM7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 AC016745.2-201ENST00000608834 3443 ntBASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.67□□□□□ -1.02
CFAP43Q8NDM7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms