Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC002519.2-203ENST00000567043 837 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 OR1E3-201ENST00000575608 948 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC091167.5-201ENST00000605689 894 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 AC111152.1-202ENST00000635848 339 ntBASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC50Q8IVM0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RN7SKP145-201ENST00000363291 303 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC016739.1-201ENST00000405359 345 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RBMY2AP-201ENST00000445405 1157 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RBMY2CP-201ENST00000448575 1157 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RBMY2DP-202ENST00000448881 1157 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RBMY2BP-202ENST00000451071 1156 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 COX6B1P2-201ENST00000489624 230 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 GTF2IP11-201ENST00000526931 420 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 OR8A2P-201ENST00000528631 952 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC068993.1-201ENST00000546724 589 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 OOSP1P2-201ENST00000579644 351 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC008507.3-201ENST00000585753 472 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 QRSL1P1-201ENST00000400977 1540 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AC090181.3-201ENST00000624777 1514 ntBASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC50Q8IVM0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 TCP1P3-201ENST00000414406 1498 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC117409.1-201ENST00000470499 1310 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 GPS2P1-201ENST00000411761 986 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 GAPDHP75-201ENST00000433910 943 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 TUBB4BP6-201ENST00000437576 479 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ATP5LP2-201ENST00000440646 311 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 OR7E116P-201ENST00000448529 957 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC009963.3-201ENST00000458090 486 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 OR7E157P-201ENST00000494376 911 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 USP9YP2-201ENST00000504503 1000 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC092349.1-201ENST00000504903 310 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 USP9YP1-201ENST00000513521 1002 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 RNU6-513P-201ENST00000516104 104 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 WBP1LP3-201ENST00000523033 208 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AP003396.4-201ENST00000527574 265 ntBASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC50Q8IVM0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms