Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 BRD7P6-201ENST00000431406 1860 ntBASIC4.4□□□□□ -1.71
VPS13CQ709C8 PART1-201ENST00000504876 5616 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS13CQ709C8 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VPS13CQ709C8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AL591848.1-201ENST00000413092 322 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 GJA6P-201ENST00000415117 1042 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC234781.3-201ENST00000452540 973 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 RPL7AP10-201ENST00000481016 791 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 OR4A17P-201ENST00000526032 904 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 OR11H3P-201ENST00000554547 982 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC018558.5-201ENST00000565840 952 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AL020997.2-201ENST00000602607 184 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC009237.13-201ENST00000603193 276 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC099494.2-201ENST00000623371 978 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC135068.5-201ENST00000624197 983 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ERG-210ENST00000442448 5034 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SNORA57.1-201ENST00000391227 145 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TPM3P3-201ENST00000521343 354 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 HMGB1P40-201ENST00000525121 540 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 MIR132-201ENST00000591554 101 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 MIR6716-201ENST00000613413 80 ntBASIC4.39□□□□□ -1.71
VPS13CQ709C8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TBC1D15-217ENST00000550746 6184 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS13CQ709C8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS13CQ709C8 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 RPL12P39-201ENST00000455456 496 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 MIR134-201ENST00000385258 73 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 RNA5SP487-201ENST00000410186 122 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 RPS17P2-201ENST00000461663 408 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 AC008147.3-201ENST00000548666 354 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 NPM1P42-201ENST00000560329 862 ntBASIC4.38□□□□□ -1.71
VPS13CQ709C8 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS13CQ709C8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS13CQ709C8 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms