Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC8.79□□□□□ -1
RC3H1Q5TC82 POU5F1P5-201ENST00000445059 658 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 RPL7P1-201ENST00000468161 747 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AC023245.1-201ENST00000468501 517 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 RPL7P9-201ENST00000468715 747 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.79□□□□□ -1
RC3H1Q5TC82 NENFP3-201ENST00000503735 313 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.79□□□□□ -1
RC3H1Q5TC82 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 MTND3P22-201ENST00000510932 243 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 SNORA74.1-201ENST00000516320 180 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 SNORA20.3-201ENST00000516880 132 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AC106038.2-201ENST00000520706 568 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC8.79□□□□□ -1
RC3H1Q5TC82 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.79□□□□□ -1
RC3H1Q5TC82 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 UBE2FP2-201ENST00000566646 462 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AC012414.6-201ENST00000568241 401 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 CR382285.1-202ENST00000604687 547 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC8.79□□□□□ -1
RC3H1Q5TC82 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.79□□□□□ -1
RC3H1Q5TC82 AC015871.5-202ENST00000623252 701 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.79□□□□□ -1
RC3H1Q5TC82 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 DLEU2L-201ENST00000371086 3555 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.79□□□□□ -1
RC3H1Q5TC82 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RC3H1Q5TC82 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC8.79□□□□□ -1
RC3H1Q5TC82 MAPK10-347ENST00000641762 2856 ntBASIC8.79□□□□□ -1
RC3H1Q5TC82 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC104964.2-201ENST00000562242 4641 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 RNFT1P3-201ENST00000340898 1052 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 SNORD115-47-201ENST00000391226 86 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 TAF9BP2-201ENST00000400856 499 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 RN7SKP129-201ENST00000410288 299 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 SNRPGP9-201ENST00000456025 225 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC096922.1-201ENST00000461635 651 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 RN7SL413P-201ENST00000482700 297 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC091951.2-201ENST00000500762 203 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 ARL2BPP6-201ENST00000512757 439 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 RFESD-208ENST00000513950 464 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC8.78□□□□□ -1
RC3H1Q5TC82 OR52K3P-201ENST00000531655 943 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC084121.1-201ENST00000533882 835 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 NXPE2P1-201ENST00000543705 726 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC106734.1-201ENST00000568646 663 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC011921.2-201ENST00000589465 152 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.78□□□□□ -1
RC3H1Q5TC82 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC005377.1-201ENST00000605126 456 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AL365503.1-201ENST00000605247 905 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 USP12-203ENST00000620323 349 ntTSL 3 BASIC8.78□□□□□ -1
RC3H1Q5TC82 ASNSP6-201ENST00000592770 1618 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC131392.2-201ENST00000505635 4332 ntBASIC8.78□□□□□ -1
RC3H1Q5TC82 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
RC3H1Q5TC82 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.78□□□□□ -1
RC3H1Q5TC82 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.78□□□□□ -1
RC3H1Q5TC82 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms