Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC135983.3-201ENST00000528049 1226 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RPL21P136-201ENST00000605378 396 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC067838.1-201ENST00000606064 577 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL159169.2-201ENST00000610061 1269 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AL162233.1-201ENST00000620014 944 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC239868.2-201ENST00000564237 4527 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.16□□□□□ -1.58
PDLIM3Q53GG5 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 LYARP1-201ENST00000436977 1501 ntBASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.15□□□□□ -1.58
PDLIM3Q53GG5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 TMSB4XP4-201ENST00000323496 618 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 RNA5SP140-201ENST00000364524 92 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 MRPS6P2-201ENST00000381143 370 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 RPL23AP17-201ENST00000401064 499 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 LYPLA1P3-201ENST00000402650 695 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL589655.1-201ENST00000405398 482 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC002524.1-201ENST00000411687 547 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 MRPS21P5-201ENST00000417885 231 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC007562.1-201ENST00000421819 517 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL590623.1-201ENST00000427864 105 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 MTCO1P57-201ENST00000432182 261 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC023274.2-201ENST00000445264 521 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL355032.1-201ENST00000472981 438 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 RWDD4P1-201ENST00000488019 565 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 NDUFB5P1-201ENST00000508134 564 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 IGLV2-28-201ENST00000520681 304 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 MIR1273E-201ENST00000581165 102 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 Z95327.3-201ENST00000610385 572 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL589743.6-201ENST00000611025 117 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL138960.1-201ENST00000613838 513 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC126175.1-201ENST00000617041 758 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL356094.1-201ENST00000624663 1212 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AP003400.6-201ENST00000624698 740 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC073488.9-201ENST00000631601 754 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC097461.1-201ENST00000568928 2821 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AOX3P-204ENST00000491025 2107 ntBASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM3Q53GG5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms