Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC010245.2-201ENST00000606908 1167 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MIR8080-201ENST00000622224 89 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AL353684.1-201ENST00000622677 1120 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AL033543.1-201ENST00000623440 13454 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 CASC19-248ENST00000641674 1356 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 AC073365.1-203ENST00000641055 1992 ntBASIC6.68□□□□□ -1.34
SHROOM1Q2M3G4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC027279.1-201ENST00000568885 4284 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 RNU1-77P-201ENST00000390868 162 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 SPTLC1P2-201ENST00000407089 121 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 RPL32P9-201ENST00000487963 407 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 GOLGA5P1-201ENST00000507317 980 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC105384.2-201ENST00000508433 640 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 RBM22P12-201ENST00000567098 1255 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC241377.1-201ENST00000619797 406 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SHROOM1Q2M3G4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 SNORA16A-201ENST00000384342 137 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AL360271.1-201ENST00000395679 510 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 RANP7-201ENST00000418085 644 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 NPM1P22-201ENST00000427761 952 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 CYCSP12-201ENST00000437729 300 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LDHBP2-201ENST00000456969 1005 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AL445687.2-201ENST00000458156 728 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC005532.2-201ENST00000467154 373 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC128716.1-201ENST00000475129 166 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC024558.1-201ENST00000505008 528 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 LDHBP3-201ENST00000514909 822 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC021766.1-201ENST00000624404 741 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC004808.2-201ENST00000627965 773 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 AC117409.1-201ENST00000470499 1310 ntBASIC6.66□□□□□ -1.34
SHROOM1Q2M3G4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms