Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK3Q00526 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK3Q00526 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.74□□□□□ -1.49
CDK3Q00526 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK3Q00526 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 AC090220.1-201ENST00000593078 1699 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 SNORD1C-201ENST00000363315 78 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 RNU6-819P-201ENST00000364116 107 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CDK3Q00526 RPL7P58-201ENST00000402913 758 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 RN7SKP286-201ENST00000410894 299 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 NME1P1-201ENST00000420914 382 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 AC019205.1-201ENST00000421830 730 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK3Q00526 HMGB3P24-201ENST00000433260 622 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.73□□□□□ -1.49
CDK3Q00526 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 AC004129.2-201ENST00000457229 287 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 RPSAP37-201ENST00000470913 821 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 RN7SL101P-201ENST00000496350 279 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 AC027544.3-201ENST00000535082 757 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CDK3Q00526 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.73□□□□□ -1.49
CDK3Q00526 AC020978.7-201ENST00000575953 1187 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 AC023389.2-201ENST00000580031 955 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 AC005224.3-201ENST00000584683 2140 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 AL021368.1-201ENST00000607490 540 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 RN7SL787P-201ENST00000613000 284 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 MIR6862-1-201ENST00000613016 70 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 MIR6862-2-201ENST00000614755 70 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.73□□□□□ -1.49
CDK3Q00526 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CDK3Q00526 AL161756.3-201ENST00000641216 2071 ntBASIC5.73□□□□□ -1.49
CDK3Q00526 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CDK3Q00526 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK3Q00526 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CDK3Q00526 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK3Q00526 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 RNU6-1331P-201ENST00000363658 106 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK3Q00526 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CDK3Q00526 AL136116.2-201ENST00000404020 785 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AL512422.1-201ENST00000407033 553 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK3Q00526 CHEK2P5-201ENST00000423877 246 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 MRPS21P3-201ENST00000436696 262 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AC096775.1-201ENST00000437724 448 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 PPIAP20-201ENST00000449839 135 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.72□□□□□ -1.49
CDK3Q00526 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CDK3Q00526 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 RN7SL174P-201ENST00000475578 289 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
CDK3Q00526 RPL32P33-201ENST00000487023 394 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 TRBV5-2-201ENST00000489095 273 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AC009120.1-201ENST00000493458 473 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 TOMM22P4-201ENST00000511318 336 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 SNORA70.17-201ENST00000516449 133 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 TMEM97P2-201ENST00000517841 403 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 AC139365.2-201ENST00000517972 253 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 HMGB1P42-201ENST00000532126 553 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CDK3Q00526 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.72□□□□□ -1.49
CDK3Q00526 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.72□□□□□ -1.49
CDK3Q00526 NPM1P5-201ENST00000557228 838 ntBASIC5.72□□□□□ -1.49
CDK3Q00526 DPPA2P4-201ENST00000563717 878 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms