Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PER3P56645 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PER3P56645 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PER3P56645 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PER3P56645 AC007114.2-201ENST00000576014 4281 ntBASIC6.13□□□□□ -1.43
PER3P56645 AC009779.8-201ENST00000641684 4384 ntBASIC6.13□□□□□ -1.43
PER3P56645 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PER3P56645 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 AL591848.4-201ENST00000567832 3472 ntBASIC6.12□□□□□ -1.43
PER3P56645 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 AL022323.4-201ENST00000623980 13120 ntBASIC6.12□□□□□ -1.43
PER3P56645 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PER3P56645 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PER3P56645 OR13C3-201ENST00000374781 1108 ntBASIC6.12□□□□□ -1.43
PER3P56645 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PER3P56645 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 SNORD116-2-201ENST00000384274 95 ntBASIC6.12□□□□□ -1.43
PER3P56645 SNORA70.9-201ENST00000384370 135 ntBASIC6.12□□□□□ -1.43
PER3P56645 SNORD116-6-201ENST00000384711 96 ntBASIC6.12□□□□□ -1.43
PER3P56645 UBBP1-201ENST00000392399 473 ntBASIC6.12□□□□□ -1.43
PER3P56645 IFIT1P1-201ENST00000400497 1449 ntBASIC6.12□□□□□ -1.43
PER3P56645 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.12□□□□□ -1.43
PER3P56645 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 MTCYBP7-201ENST00000419540 1134 ntBASIC6.12□□□□□ -1.43
PER3P56645 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 SNRPFP2-201ENST00000440710 251 ntBASIC6.12□□□□□ -1.43
PER3P56645 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 NMNAT1P3-201ENST00000457517 888 ntBASIC6.12□□□□□ -1.43
PER3P56645 RPL5P13-201ENST00000462840 709 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC099340.1-201ENST00000475247 599 ntBASIC6.12□□□□□ -1.43
PER3P56645 RPL17P2-201ENST00000491913 451 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 AC112484.3-201ENST00000505910 329 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC018797.1-201ENST00000510791 255 ntBASIC6.12□□□□□ -1.43
PER3P56645 SNX18P23-201ENST00000510867 677 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.12□□□□□ -1.43
PER3P56645 SETP21-201ENST00000514799 892 ntBASIC6.12□□□□□ -1.43
PER3P56645 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 RFPL4AP3-201ENST00000515267 345 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC079064.1-201ENST00000528365 362 ntBASIC6.12□□□□□ -1.43
PER3P56645 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC099786.3-201ENST00000565735 1410 ntBASIC6.12□□□□□ -1.43
PER3P56645 MIR4789-201ENST00000577469 82 ntBASIC6.12□□□□□ -1.43
PER3P56645 AC008088.1-201ENST00000580993 280 ntBASIC6.12□□□□□ -1.43
PER3P56645 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 CCDC58P3-201ENST00000590792 430 ntBASIC6.12□□□□□ -1.43
PER3P56645 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 AC107952.2-201ENST00000606048 486 ntBASIC6.12□□□□□ -1.43
PER3P56645 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.12□□□□□ -1.43
PER3P56645 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PER3P56645 AC092159.4-201ENST00000624944 550 ntBASIC6.12□□□□□ -1.43
PER3P56645 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 AP003399.1-201ENST00000637534 361 ntBASIC6.12□□□□□ -1.43
PER3P56645 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.12□□□□□ -1.43
PER3P56645 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
PER3P56645 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PER3P56645 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PER3P56645 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PER3P56645 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PER3P56645 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PER3P56645 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PER3P56645 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
PER3P56645 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PER3P56645 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PER3P56645 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms