Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.88□□□□□ -1.47
NR1H2P55055 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 AL445383.1-201ENST00000554689 874 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC019322.1-201ENST00000571869 389 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC020978.7-201ENST00000575953 1187 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 RN7SL230P-201ENST00000580835 303 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC068726.1-201ENST00000610993 341 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 MIR6071-201ENST00000616741 78 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC005277.2-201ENST00000617898 390 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 MIR6778-201ENST00000617912 73 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 AL645927.2-201ENST00000618350 349 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 MIR6806-201ENST00000622141 64 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 AL035425.4-201ENST00000624509 1063 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AL138960.2-201ENST00000625145 535 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 AL034546.1-201ENST00000623740 3693 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC011416.1-201ENST00000514947 1732 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 GTF2IP4-201ENST00000453092 2054 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC004076.2-201ENST00000620532 3323 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 RN7SKP81-201ENST00000365603 331 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 SNORA5.1-201ENST00000384275 131 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 VIM2P-201ENST00000402383 1294 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 MIR1275-201ENST00000408770 80 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.87□□□□□ -1.47
NR1H2P55055 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.87□□□□□ -1.47
NR1H2P55055 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 UBBP5-201ENST00000446970 266 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 AC092967.1-201ENST00000449016 481 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 CCNJP1-201ENST00000450600 1149 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 RPL7AP23-201ENST00000482625 776 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 AC122718.2-201ENST00000505325 591 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 AL390198.2-201ENST00000510553 222 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.87□□□□□ -1.47
NR1H2P55055 OR4A41P-201ENST00000533053 928 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 AC007068.2-201ENST00000543168 395 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 ANP32BP1-202ENST00000568553 737 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 MIR3154-201ENST00000577829 84 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 MIR4271-201ENST00000582451 67 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.87□□□□□ -1.47
NR1H2P55055 AL022394.1-201ENST00000606979 292 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 AC006328.2-201ENST00000623198 397 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 AC012005.2-201ENST00000624333 397 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 CCNT2P1-201ENST00000423082 1315 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 BCORP1-203ENST00000513194 5093 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 AC007382.1-201ENST00000624376 2618 ntBASIC5.87□□□□□ -1.47
NR1H2P55055 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NR1H2P55055 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.87□□□□□ -1.47
NR1H2P55055 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.87□□□□□ -1.47
NR1H2P55055 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms