Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC122134.1-201ENST00000565664 1104 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 DHFRP1-201ENST00000579682 559 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AC090616.1-201ENST00000583895 447 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 AF230666.2-201ENST00000602328 725 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 SUMO2P14-201ENST00000604488 293 ntBASIC6.43□□□□□ -1.38
NEK3P51956 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.43□□□□□ -1.38
NEK3P51956 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
NEK3P51956 SHQ1P1-201ENST00000437111 1544 ntBASIC6.43□□□□□ -1.38
NEK3P51956 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 AP005432.1-201ENST00000580891 3485 ntBASIC6.43□□□□□ -1.38
NEK3P51956 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.43□□□□□ -1.38
NEK3P51956 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.43□□□□□ -1.38
NEK3P51956 AC092692.1-201ENST00000623625 2595 ntBASIC6.43□□□□□ -1.38
NEK3P51956 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
NEK3P51956 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.43□□□□□ -1.38
NEK3P51956 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.42□□□□□ -1.38
NEK3P51956 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NEK3P51956 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEK3P51956 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.42□□□□□ -1.38
NEK3P51956 RNU2-17P-201ENST00000410290 190 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.42□□□□□ -1.38
NEK3P51956 AL606495.1-201ENST00000422100 813 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AC092865.3-201ENST00000425390 1026 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 AC092967.1-201ENST00000449016 481 ntBASIC6.42□□□□□ -1.38
NEK3P51956 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 RN7SL205P-201ENST00000490174 284 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AOX3P-204ENST00000491025 2107 ntBASIC6.42□□□□□ -1.38
NEK3P51956 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEK3P51956 SNX18P25-201ENST00000510539 758 ntBASIC6.42□□□□□ -1.38
NEK3P51956 HSD3BP3-201ENST00000514706 994 ntBASIC6.42□□□□□ -1.38
NEK3P51956 COX6B1P4-201ENST00000519826 484 ntBASIC6.42□□□□□ -1.38
NEK3P51956 IGHV4-55-201ENST00000520889 368 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.42□□□□□ -1.38
NEK3P51956 HNRNPCP1-201ENST00000556181 766 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 AC027216.1-201ENST00000577726 685 ntBASIC6.42□□□□□ -1.38
NEK3P51956 MIR4502-201ENST00000580432 81 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.42□□□□□ -1.38
NEK3P51956 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.42□□□□□ -1.38
NEK3P51956 AC079880.2-201ENST00000603790 1213 ntBASIC6.42□□□□□ -1.38
NEK3P51956 RPSAP75-201ENST00000605848 301 ntBASIC6.42□□□□□ -1.38
NEK3P51956 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.42□□□□□ -1.38
NEK3P51956 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEK3P51956 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEK3P51956 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
NEK3P51956 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
NEK3P51956 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
NEK3P51956 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 MTCO1P7-201ENST00000419523 1542 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AL136984.1-201ENST00000607611 1893 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 AC005725.1-201ENST00000577346 2607 ntBASIC6.41□□□□□ -1.38
NEK3P51956 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEK3P51956 SNORA63.3-201ENST00000362682 132 ntBASIC6.41□□□□□ -1.38
NEK3P51956 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.41□□□□□ -1.38
NEK3P51956 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.41□□□□□ -1.38
NEK3P51956 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NEK3P51956 ATP5F1P6-201ENST00000402768 767 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC007562.1-201ENST00000421819 517 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AL645936.1-201ENST00000441979 518 ntBASIC6.41□□□□□ -1.38
NEK3P51956 DNAJC19P5-201ENST00000443295 316 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.41□□□□□ -1.38
NEK3P51956 AC023274.2-201ENST00000445264 521 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEK3P51956 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.41□□□□□ -1.38
NEK3P51956 RPS27AP3-201ENST00000453803 454 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.41□□□□□ -1.38
NEK3P51956 RN7SL369P-201ENST00000477138 299 ntBASIC6.41□□□□□ -1.38
NEK3P51956 RN7SL714P-201ENST00000487050 298 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.41□□□□□ -1.38
NEK3P51956 AC106800.3-201ENST00000511389 308 ntBASIC6.41□□□□□ -1.38
NEK3P51956 RNA5SP206-201ENST00000516703 121 ntBASIC6.41□□□□□ -1.38
NEK3P51956 IGKV1D-22-201ENST00000518953 324 ntBASIC6.41□□□□□ -1.38
NEK3P51956 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.41□□□□□ -1.38
NEK3P51956 AC019227.1-201ENST00000526902 510 ntBASIC6.41□□□□□ -1.38
NEK3P51956 UBTFL9-201ENST00000534504 1148 ntBASIC6.41□□□□□ -1.38
NEK3P51956 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NEK3P51956 AL845552.1-201ENST00000556820 323 ntBASIC6.41□□□□□ -1.38
NEK3P51956 AC002519.2-203ENST00000567043 837 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms