Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.83□□□□□ -1.48
CLCNKAP51800 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CLCNKAP51800 WDR95P-201ENST00000425638 1542 ntBASIC5.83□□□□□ -1.48
CLCNKAP51800 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.83□□□□□ -1.48
CLCNKAP51800 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLCNKAP51800 PARP4P2-201ENST00000446672 3326 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLCNKAP51800 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLCNKAP51800 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLCNKAP51800 SNORA40.4-201ENST00000390971 128 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC007068.1-201ENST00000396690 844 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 RPS3AP2-201ENST00000407190 754 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 IPPKP1-201ENST00000422501 768 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 RPS29P14-201ENST00000431518 171 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 RPL23AP19-201ENST00000436229 369 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 RPL37AP8-201ENST00000494116 276 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 GAPDHP71-201ENST00000511530 1003 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC092121.1-201ENST00000569452 202 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AC027243.2-201ENST00000602530 724 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AC005014.3-201ENST00000605985 190 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AC092574.1-201ENST00000609771 420 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AC117490.2-201ENST00000610042 594 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 AL355974.3-201ENST00000617383 467 ntBASIC5.82□□□□□ -1.48
CLCNKAP51800 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CLCNKAP51800 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLCNKAP51800 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLCNKAP51800 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLCNKAP51800 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AC114876.1-201ENST00000490962 1366 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.81□□□□□ -1.48
CLCNKAP51800 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLCNKAP51800 OR13C1P-202ENST00000641378 2919 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CLCNKAP51800 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLCNKAP51800 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLCNKAP51800 OR52B3P-201ENST00000314715 928 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CLCNKAP51800 MT-RNR1-201ENST00000389680 954 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 RPS4XP5-201ENST00000419038 768 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 RPS3P2-201ENST00000421346 701 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 OR5W1P-201ENST00000423705 938 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 PRUNEP1-201ENST00000425846 705 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AL389925.1-201ENST00000432257 728 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 Z85994.2-201ENST00000434327 452 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 PCBP2P1-201ENST00000437262 977 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 CUBNP2-201ENST00000443534 1139 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.81□□□□□ -1.48
CLCNKAP51800 AP006222.1-205ENST00000450734 457 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.81□□□□□ -1.48
CLCNKAP51800 UGT2A3P7-201ENST00000510485 734 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.81□□□□□ -1.48
CLCNKAP51800 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.81□□□□□ -1.48
CLCNKAP51800 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms