Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
SMARCA4P51532 EPS15P1-202ENST00000459691 2071 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA4P51532 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
SMARCA4P51532 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SMARCA4P51532 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.77□□□□□ -0.85
SMARCA4P51532 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA4P51532 RPL31P44-201ENST00000447680 377 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 AC097484.1-201ENST00000471148 389 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 PRELID3BP5-201ENST00000508612 460 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
SMARCA4P51532 AC060766.1-201ENST00000590824 627 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 AC068790.7-201ENST00000602347 528 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC9.77□□□□□ -0.85
SMARCA4P51532 AP001885.1-201ENST00000621658 558 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 AL078621.3-201ENST00000623707 2042 ntBASIC9.77□□□□□ -0.85
SMARCA4P51532 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SMARCA4P51532 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SMARCA4P51532 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SMARCA4P51532 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC9.76□□□□□ -0.85
SMARCA4P51532 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 MALAT1-202ENST00000534336 8708 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 ZNF840P-201ENST00000504759 1996 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 AC019050.1-201ENST00000418508 492 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 AC104634.1-201ENST00000452720 462 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 HNRNPDLP2-201ENST00000455248 751 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.76□□□□□ -0.85
SMARCA4P51532 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC9.76□□□□□ -0.85
SMARCA4P51532 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.76□□□□□ -0.85
SMARCA4P51532 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC9.76□□□□□ -0.85
SMARCA4P51532 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 AC022034.1-201ENST00000512867 2156 ntBASIC9.76□□□□□ -0.85
SMARCA4P51532 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
SMARCA4P51532 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SMARCA4P51532 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC010132.2-201ENST00000295493 1043 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 RNA5SP505-201ENST00000364748 108 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SMARCA4P51532 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC073648.4-201ENST00000442655 781 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA4P51532 RPL7P16-201ENST00000479738 738 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.75□□□□□ -0.85
SMARCA4P51532 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.75□□□□□ -0.85
SMARCA4P51532 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 CASC19-221ENST00000641309 1382 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 AC232271.1-201ENST00000602455 2715 ntBASIC9.75□□□□□ -0.85
SMARCA4P51532 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SMARCA4P51532 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SMARCA4P51532 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC009127.1-201ENST00000467090 155 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AC079080.1-201ENST00000479841 822 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 RN7SL356P-201ENST00000582228 248 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC9.74□□□□□ -0.85
SMARCA4P51532 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC074101.1-201ENST00000637861 241 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
SMARCA4P51532 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.74□□□□□ -0.85
SMARCA4P51532 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
SMARCA4P51532 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.74□□□□□ -0.85
SMARCA4P51532 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
SMARCA4P51532 AC013268.3-201ENST00000262716 2324 ntBASIC9.74□□□□□ -0.85
SMARCA4P51532 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms