Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPL23AP85-201ENST00000421838 433 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 MTCO2P1-201ENST00000424648 477 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AL354707.3-201ENST00000427308 331 ntBASIC7.2□□□□□ -1.26
MRE11P49959 USP12PY-201ENST00000427677 1064 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC023141.6-201ENST00000429418 337 ntBASIC7.2□□□□□ -1.26
MRE11P49959 IGLV3-4-201ENST00000432300 244 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.2□□□□□ -1.26
MRE11P49959 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.2□□□□□ -1.26
MRE11P49959 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.2□□□□□ -1.26
MRE11P49959 FTH1P2-201ENST00000466086 412 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC082651.2-201ENST00000496833 166 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC093763.2-201ENST00000505334 1223 ntBASIC7.2□□□□□ -1.26
MRE11P49959 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.2□□□□□ -1.26
MRE11P49959 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.2□□□□□ -1.26
MRE11P49959 RNA5SP441-201ENST00000516809 88 ntBASIC7.2□□□□□ -1.26
MRE11P49959 GTF2IP11-201ENST00000526931 420 ntBASIC7.2□□□□□ -1.26
MRE11P49959 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.2□□□□□ -1.26
MRE11P49959 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AC009120.3-201ENST00000563335 499 ntBASIC7.2□□□□□ -1.26
MRE11P49959 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.2□□□□□ -1.26
MRE11P49959 MTATP6P24-201ENST00000576835 677 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.2□□□□□ -1.26
MRE11P49959 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.2□□□□□ -1.26
MRE11P49959 AC011447.2-201ENST00000592921 283 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AL356863.1-201ENST00000623378 1080 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC005858.3-201ENST00000624756 589 ntBASIC7.2□□□□□ -1.26
MRE11P49959 AC099654.9-201ENST00000637055 678 ntBASIC7.2□□□□□ -1.26
MRE11P49959 OR7E91P-202ENST00000642062 1198 ntBASIC7.2□□□□□ -1.26
MRE11P49959 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
MRE11P49959 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
MRE11P49959 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.2□□□□□ -1.26
MRE11P49959 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.2□□□□□ -1.26
MRE11P49959 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
MRE11P49959 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MRE11P49959 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
MRE11P49959 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
MRE11P49959 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.19□□□□□ -1.26
MRE11P49959 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
MRE11P49959 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.19□□□□□ -1.26
MRE11P49959 AL353692.2-201ENST00000407054 335 ntBASIC7.19□□□□□ -1.26
MRE11P49959 RNU6-564P-201ENST00000410983 104 ntBASIC7.19□□□□□ -1.26
MRE11P49959 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.19□□□□□ -1.26
MRE11P49959 AL731534.1-201ENST00000434711 269 ntBASIC7.19□□□□□ -1.26
MRE11P49959 ARMC4P1-201ENST00000438905 707 ntBASIC7.19□□□□□ -1.26
MRE11P49959 GAPDHP37-201ENST00000442317 968 ntBASIC7.19□□□□□ -1.26
MRE11P49959 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.19□□□□□ -1.26
MRE11P49959 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.19□□□□□ -1.26
MRE11P49959 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.19□□□□□ -1.26
MRE11P49959 RPL7AP23-201ENST00000482625 776 ntBASIC7.19□□□□□ -1.26
MRE11P49959 HMGN1P16-201ENST00000508308 283 ntBASIC7.19□□□□□ -1.26
MRE11P49959 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 PPIAP14-201ENST00000577627 496 ntBASIC7.19□□□□□ -1.26
MRE11P49959 AC027216.1-201ENST00000577726 685 ntBASIC7.19□□□□□ -1.26
MRE11P49959 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.19□□□□□ -1.26
MRE11P49959 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.19□□□□□ -1.26
MRE11P49959 AC108865.2-201ENST00000606881 432 ntBASIC7.19□□□□□ -1.26
MRE11P49959 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.19□□□□□ -1.26
MRE11P49959 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.19□□□□□ -1.26
MRE11P49959 AC073857.1-201ENST00000625082 1054 ntBASIC7.19□□□□□ -1.26
MRE11P49959 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
MRE11P49959 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
MRE11P49959 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
MRE11P49959 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
MRE11P49959 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.19□□□□□ -1.26
MRE11P49959 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
MRE11P49959 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.18□□□□□ -1.26
MRE11P49959 MIR323A-201ENST00000362199 86 ntBASIC7.18□□□□□ -1.26
MRE11P49959 RNA5SP510-201ENST00000364697 99 ntBASIC7.18□□□□□ -1.26
MRE11P49959 MIR7-1-201ENST00000384871 110 ntBASIC7.18□□□□□ -1.26
MRE11P49959 VIM2P-201ENST00000402383 1294 ntBASIC7.18□□□□□ -1.26
MRE11P49959 PTGES3P2-201ENST00000407942 482 ntBASIC7.18□□□□□ -1.26
MRE11P49959 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
MRE11P49959 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.18□□□□□ -1.26
MRE11P49959 GTF2IP5-201ENST00000414608 731 ntBASIC7.18□□□□□ -1.26
MRE11P49959 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms