Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.92□□□□□ -1.46
HTTP42858 ITPK1-AS1-201ENST00000553639 4701 ntBASIC5.92□□□□□ -1.46
HTTP42858 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
HTTP42858 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HTTP42858 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.92□□□□□ -1.46
HTTP42858 NCAM1-222ENST00000615285 6045 ntTSL 5 BASIC5.92□□□□□ -1.46
HTTP42858 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 SNORA70F-201ENST00000384142 135 ntBASIC5.92□□□□□ -1.46
HTTP42858 HMGB3P7-201ENST00000400214 611 ntBASIC5.92□□□□□ -1.46
HTTP42858 RPL12P28-201ENST00000430852 489 ntBASIC5.92□□□□□ -1.46
HTTP42858 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 NDUFA5P8-201ENST00000449019 346 ntBASIC5.92□□□□□ -1.46
HTTP42858 AC109635.6-201ENST00000525487 1113 ntBASIC5.92□□□□□ -1.46
HTTP42858 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.92□□□□□ -1.46
HTTP42858 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HTTP42858 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.91□□□□□ -1.46
HTTP42858 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 RNA5SP44-201ENST00000410446 133 ntBASIC5.91□□□□□ -1.46
HTTP42858 AC007562.1-201ENST00000421819 517 ntBASIC5.91□□□□□ -1.46
HTTP42858 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.91□□□□□ -1.46
HTTP42858 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.91□□□□□ -1.46
HTTP42858 AC023274.2-201ENST00000445264 521 ntBASIC5.91□□□□□ -1.46
HTTP42858 AC083829.1-201ENST00000503756 657 ntBASIC5.91□□□□□ -1.46
HTTP42858 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.91□□□□□ -1.46
HTTP42858 AC021483.2-201ENST00000567415 758 ntBASIC5.91□□□□□ -1.46
HTTP42858 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.91□□□□□ -1.46
HTTP42858 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.91□□□□□ -1.46
HTTP42858 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.91□□□□□ -1.46
HTTP42858 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.91□□□□□ -1.46
HTTP42858 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.91□□□□□ -1.46
HTTP42858 PABPC1P8-201ENST00000452851 2086 ntBASIC5.91□□□□□ -1.46
HTTP42858 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.91□□□□□ -1.46
HTTP42858 RN7SKP92-201ENST00000517266 244 ntBASIC5.91□□□□□ -1.46
HTTP42858 NPM1P42-201ENST00000560329 862 ntBASIC5.91□□□□□ -1.46
HTTP42858 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.91□□□□□ -1.46
HTTP42858 AP005131.7-201ENST00000610087 611 ntBASIC5.91□□□□□ -1.46
HTTP42858 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.91□□□□□ -1.46
HTTP42858 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HTTP42858 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.9□□□□□ -1.46
HTTP42858 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HTTP42858 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HTTP42858 AL359837.1-201ENST00000381357 287 ntBASIC5.9□□□□□ -1.46
HTTP42858 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HTTP42858 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.9□□□□□ -1.46
HTTP42858 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.9□□□□□ -1.46
HTTP42858 OR52A4P-201ENST00000472867 958 ntBASIC5.9□□□□□ -1.46
HTTP42858 PPM1AP1-201ENST00000502740 1135 ntBASIC5.9□□□□□ -1.46
HTTP42858 RNA5SP392-201ENST00000516905 112 ntBASIC5.9□□□□□ -1.46
HTTP42858 OR11H3P-201ENST00000554547 982 ntBASIC5.9□□□□□ -1.46
HTTP42858 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HTTP42858 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HTTP42858 AC135068.5-201ENST00000624197 983 ntBASIC5.9□□□□□ -1.46
HTTP42858 AC011944.2-201ENST00000624440 683 ntBASIC5.9□□□□□ -1.46
HTTP42858 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HTTP42858 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC5.9□□□□□ -1.46
HTTP42858 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HTTP42858 CCT8P1-201ENST00000413611 1657 ntBASIC5.9□□□□□ -1.46
HTTP42858 RN7SKP263-201ENST00000411194 309 ntBASIC5.9□□□□□ -1.46
HTTP42858 AC005154.2-201ENST00000438110 379 ntBASIC5.9□□□□□ -1.46
HTTP42858 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.9□□□□□ -1.46
HTTP42858 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.9□□□□□ -1.46
HTTP42858 OR5M2P-201ENST00000529003 936 ntBASIC5.9□□□□□ -1.46
HTTP42858 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.9□□□□□ -1.46
HTTP42858 MIR4444-1-201ENST00000581696 74 ntBASIC5.9□□□□□ -1.46
HTTP42858 MIR4444-2-201ENST00000584390 74 ntBASIC5.9□□□□□ -1.46
HTTP42858 AC006511.3-201ENST00000624929 1783 ntBASIC5.9□□□□□ -1.47
HTTP42858 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC5.9□□□□□ -1.47
HTTP42858 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
HTTP42858 AC104964.2-201ENST00000562242 4641 ntBASIC5.9□□□□□ -1.47
HTTP42858 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HTTP42858 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
HTTP42858 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.9□□□□□ -1.47
HTTP42858 RPS3AP23-201ENST00000401762 784 ntBASIC5.9□□□□□ -1.47
HTTP42858 RPL7AP52-201ENST00000458096 790 ntBASIC5.9□□□□□ -1.47
HTTP42858 IGKV2D-10-201ENST00000520194 281 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms