Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC120036.2-201ENST00000509729 1474 ntBASIC5.38□□□□□ -1.55
RFC3P40938 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RFC3P40938 AL132656.3-201ENST00000606384 1595 ntBASIC5.38□□□□□ -1.55
RFC3P40938 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 AC016583.1-201ENST00000624221 2431 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AC020656.2-201ENST00000613291 5309 ntBASIC5.37□□□□□ -1.55
RFC3P40938 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RFC3P40938 MIR375-201ENST00000362103 64 ntBASIC5.37□□□□□ -1.55
RFC3P40938 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 NPM1P38-201ENST00000403835 865 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AC016739.1-201ENST00000405359 345 ntBASIC5.37□□□□□ -1.55
RFC3P40938 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 RN7SKP29-201ENST00000410957 272 ntBASIC5.37□□□□□ -1.55
RFC3P40938 RPS4XP5-201ENST00000419038 768 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AC092651.1-201ENST00000426110 312 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AC099677.3-201ENST00000427081 395 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AP000281.1-201ENST00000444036 316 ntBASIC5.37□□□□□ -1.55
RFC3P40938 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.37□□□□□ -1.55
RFC3P40938 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 AP000648.1-201ENST00000529682 397 ntBASIC5.37□□□□□ -1.55
RFC3P40938 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.37□□□□□ -1.55
RFC3P40938 AC016839.1-201ENST00000578162 867 ntBASIC5.37□□□□□ -1.55
RFC3P40938 OOSP1P2-201ENST00000579644 351 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.37□□□□□ -1.55
RFC3P40938 AC025857.2-201ENST00000602711 238 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AL031601.1-201ENST00000605702 394 ntBASIC5.37□□□□□ -1.55
RFC3P40938 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.37□□□□□ -1.55
RFC3P40938 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.37□□□□□ -1.55
RFC3P40938 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RFC3P40938 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RFC3P40938 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.37□□□□□ -1.55
RFC3P40938 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.37□□□□□ -1.55
RFC3P40938 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RFC3P40938 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFC3P40938 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RFC3P40938 HMGB1P20-201ENST00000402555 677 ntBASIC5.36□□□□□ -1.55
RFC3P40938 RPS3AP2-201ENST00000407190 754 ntBASIC5.36□□□□□ -1.55
RFC3P40938 HMGA1P8-201ENST00000414130 321 ntBASIC5.36□□□□□ -1.55
RFC3P40938 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 AC127526.2-201ENST00000426436 775 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AL590399.2-201ENST00000427536 309 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 AC079922.1-201ENST00000443291 359 ntBASIC5.36□□□□□ -1.55
RFC3P40938 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 AC023141.9-201ENST00000458734 412 ntBASIC5.36□□□□□ -1.55
RFC3P40938 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.36□□□□□ -1.55
RFC3P40938 DEFB109A-201ENST00000482450 265 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
RFC3P40938 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.36□□□□□ -1.55
RFC3P40938 GAPDHP71-201ENST00000511530 1003 ntBASIC5.36□□□□□ -1.55
RFC3P40938 RPL7L1P4-201ENST00000513004 707 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.36□□□□□ -1.55
RFC3P40938 SCARNA21.2-201ENST00000516600 166 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.36□□□□□ -1.55
RFC3P40938 CYCSP22-201ENST00000517555 339 ntBASIC5.36□□□□□ -1.55
RFC3P40938 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.36□□□□□ -1.55
RFC3P40938 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.36□□□□□ -1.55
RFC3P40938 AL139041.1-201ENST00000605480 610 ntBASIC5.36□□□□□ -1.55
RFC3P40938 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.36□□□□□ -1.55
RFC3P40938 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.36□□□□□ -1.55
RFC3P40938 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.36□□□□□ -1.55
RFC3P40938 AL049767.1-202ENST00000637826 242 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms