Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SHMT2P34897 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.63□□□□□ -1.51
SHMT2P34897 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHMT2P34897 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.63□□□□□ -1.51
SHMT2P34897 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.63□□□□□ -1.51
SHMT2P34897 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.63□□□□□ -1.51
SHMT2P34897 OOSP1P2-201ENST00000579644 351 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 AC060780.2-201ENST00000589047 198 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 AC008521.2-201ENST00000591021 259 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 AC027243.2-201ENST00000602530 724 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SHMT2P34897 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SHMT2P34897 FBXL21-201ENST00000297158 1305 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 AC117409.1-201ENST00000470499 1310 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
SHMT2P34897 NR1H5P-201ENST00000452683 1377 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHMT2P34897 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SHMT2P34897 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.63□□□□□ -1.51
SHMT2P34897 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SHMT2P34897 AC091305.2-201ENST00000624049 1576 ntBASIC5.63□□□□□ -1.51
SHMT2P34897 AC015689.2-201ENST00000528172 1738 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SHMT2P34897 AL161912.4-201ENST00000623889 2468 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 MIR133A2-201ENST00000347538 102 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHMT2P34897 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 NPM1P37-201ENST00000403105 874 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 SNORA11.3-201ENST00000408471 128 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 AL022331.1-201ENST00000429025 477 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.62□□□□□ -1.51
SHMT2P34897 MTND2P40-201ENST00000436718 841 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 AC073109.1-201ENST00000445066 978 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.62□□□□□ -1.51
SHMT2P34897 AC006539.1-201ENST00000481419 501 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.62□□□□□ -1.51
SHMT2P34897 AC074255.1-201ENST00000511259 501 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 AC022826.1-201ENST00000519383 805 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.62□□□□□ -1.51
SHMT2P34897 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.62□□□□□ -1.51
SHMT2P34897 RN7SL544P-201ENST00000617232 284 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 SNORA11.6-201ENST00000619030 128 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 RN7SL763P-201ENST00000620922 284 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.62□□□□□ -1.51
SHMT2P34897 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHMT2P34897 AC079776.5-201ENST00000641920 211 ntBASIC5.62□□□□□ -1.51
SHMT2P34897 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
SHMT2P34897 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
SHMT2P34897 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.62□□□□□ -1.51
SHMT2P34897 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.62□□□□□ -1.51
SHMT2P34897 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SHMT2P34897 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHMT2P34897 AC016745.2-201ENST00000608834 3443 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.61□□□□□ -1.51
SHMT2P34897 AC117434.1-201ENST00000419971 836 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.61□□□□□ -1.51
SHMT2P34897 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.61□□□□□ -1.51
SHMT2P34897 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 RPL31P15-201ENST00000449770 338 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.61□□□□□ -1.51
SHMT2P34897 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 AC105384.2-201ENST00000508433 640 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHMT2P34897 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 GTF2IP11-201ENST00000526931 420 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 AP004607.3-201ENST00000530354 3915 ntBASIC5.61□□□□□ -1.51
SHMT2P34897 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHMT2P34897 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.61□□□□□ -1.51
SHMT2P34897 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
SHMT2P34897 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
SHMT2P34897 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.61□□□□□ -1.51
SHMT2P34897 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms