Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR3936-201ENST00000584304 110 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.11□□□□□ -1.43
CASQ1P31415 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.11□□□□□ -1.43
CASQ1P31415 AL356608.1-201ENST00000610034 820 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.11□□□□□ -1.43
CASQ1P31415 AL139407.1-201ENST00000613826 1175 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 AC026367.3-201ENST00000619032 590 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.11□□□□□ -1.43
CASQ1P31415 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CASQ1P31415 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.11□□□□□ -1.43
CASQ1P31415 GNL2P1-201ENST00000451274 2190 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 STX3-208ENST00000641815 3236 ntBASIC6.11□□□□□ -1.43
CASQ1P31415 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASQ1P31415 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CASQ1P31415 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CASQ1P31415 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CASQ1P31415 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CASQ1P31415 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CASQ1P31415 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 BTBD10P1-201ENST00000549824 1352 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CASQ1P31415 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CASQ1P31415 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CASQ1P31415 VDAC2P1-201ENST00000399358 958 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 RN7SKP117-201ENST00000410175 264 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 SNRPFP2-201ENST00000440710 251 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 TRIM60P16-201ENST00000444048 694 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.1□□□□□ -1.43
CASQ1P31415 AL591363.1-201ENST00000450091 483 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC009244.1-201ENST00000450566 258 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 DUTP1-201ENST00000493631 470 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 ENPP7P11-201ENST00000505915 627 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC084851.2-201ENST00000530377 364 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC122688.1-201ENST00000541494 223 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 VDAC2P2-201ENST00000544463 901 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AC127381.1-201ENST00000555979 939 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.1□□□□□ -1.43
CASQ1P31415 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 AL121890.2-201ENST00000617644 465 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AF117829.2-201ENST00000619538 361 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 AC093775.1-201ENST00000624154 1868 ntBASIC6.1□□□□□ -1.43
CASQ1P31415 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CASQ1P31415 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CASQ1P31415 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
CASQ1P31415 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.09□□□□□ -1.43
CASQ1P31415 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.09□□□□□ -1.43
CASQ1P31415 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
CASQ1P31415 UBTFL2-201ENST00000411859 1191 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AL139135.1-201ENST00000412675 209 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC073465.2-201ENST00000440938 498 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AL590004.3-202ENST00000445883 451 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AL589765.3-201ENST00000446084 462 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 RPS18P1-201ENST00000447840 458 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC019084.1-201ENST00000457337 432 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 TPT1P1-201ENST00000458495 518 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 CR383658.1-201ENST00000514609 734 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 AP001994.1-201ENST00000527539 826 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC124891.1-201ENST00000536322 519 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.09□□□□□ -1.43
CASQ1P31415 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.09□□□□□ -1.43
CASQ1P31415 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 MIR4732-201ENST00000581873 76 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.09□□□□□ -1.43
CASQ1P31415 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.09□□□□□ -1.43
CASQ1P31415 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.09□□□□□ -1.43
CASQ1P31415 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
CASQ1P31415 AP001005.3-201ENST00000622049 129 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 OR11H2-202ENST00000641517 1085 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.09□□□□□ -1.43
CASQ1P31415 AC025574.1-201ENST00000554784 1653 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
CASQ1P31415 AC112255.1-201ENST00000624070 2493 ntBASIC6.09□□□□□ -1.43
CASQ1P31415 MTCO1P28-201ENST00000574177 1528 ntBASIC6.09□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms