Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.18□□□□□ -1.26
CNGA1P29973 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.18□□□□□ -1.26
CNGA1P29973 MIR4301-201ENST00000577203 66 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.18□□□□□ -1.26
CNGA1P29973 AC005332.4-201ENST00000592752 579 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.18□□□□□ -1.26
CNGA1P29973 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.18□□□□□ -1.26
CNGA1P29973 U1.34-201ENST00000618578 162 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.18□□□□□ -1.26
CNGA1P29973 AL445984.1-201ENST00000637834 659 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CNGA1P29973 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 AC062022.1-201ENST00000451026 1684 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.18□□□□□ -1.26
CNGA1P29973 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.18□□□□□ -1.26
CNGA1P29973 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
CNGA1P29973 AL359715.4-201ENST00000606629 1436 ntBASIC7.18□□□□□ -1.26
CNGA1P29973 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNGA1P29973 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CNGA1P29973 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 AC130360.2-201ENST00000533477 1556 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 ZNF90P1-201ENST00000480493 1951 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 UGT2B27P-201ENST00000505092 1620 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 RNU6-1000P-201ENST00000391066 106 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 MTND4LP13-201ENST00000425022 298 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.17□□□□□ -1.26
CNGA1P29973 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 RPL34P33-201ENST00000486062 334 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 RN7SL284P-201ENST00000498823 275 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC008945.1-201ENST00000505144 499 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 SNORA58-201ENST00000505219 137 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.17□□□□□ -1.26
CNGA1P29973 IGLV3-6-201ENST00000523937 250 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNGA1P29973 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 AC051619.2-201ENST00000559063 397 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC116158.1-201ENST00000560231 2129 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 AC068620.3-201ENST00000602749 560 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC027334.1-201ENST00000603257 310 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC079880.2-201ENST00000603790 1213 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC090912.3-201ENST00000609775 533 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AL512624.1-201ENST00000613638 469 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC245014.3-201ENST00000618589 347 ntBASIC7.17□□□□□ -1.26
CNGA1P29973 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNGA1P29973 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNGA1P29973 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNGA1P29973 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CNGA1P29973 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNGA1P29973 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
CNGA1P29973 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.17□□□□□ -1.26
CNGA1P29973 ZNF402P-201ENST00000404435 3100 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNGA1P29973 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNGA1P29973 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 AC025809.2-201ENST00000625085 1802 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 RNA5SP242-201ENST00000364171 118 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CNGA1P29973 AL672167.2-201ENST00000377164 879 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 RNU6-31P-201ENST00000384388 108 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CNGA1P29973 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 RPL26P37-201ENST00000411983 438 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 AL024507.1-201ENST00000412741 274 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 MTCYBP7-201ENST00000419540 1134 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 CYCSP52-201ENST00000422857 310 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.16□□□□□ -1.26
CNGA1P29973 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC7.16□□□□□ -1.26
CNGA1P29973 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.16□□□□□ -1.26
CNGA1P29973 MTCYBP32-201ENST00000427945 1084 ntBASIC7.16□□□□□ -1.26
CNGA1P29973 BX119904.1-201ENST00000432026 348 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms