Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.5□□□□□ -1.37
VAMP1P23763 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VAMP1P23763 NCOA4P3-201ENST00000513203 1877 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 OR10J6P-201ENST00000289731 930 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AL121657.1-201ENST00000327215 531 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VAMP1P23763 RNU4-2-201ENST00000365668 141 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VAMP1P23763 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 SNORA14B-201ENST00000384452 135 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 RNU6-178P-201ENST00000384631 104 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 CCNYL3-201ENST00000407030 998 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 MIR320C1-201ENST00000408566 88 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 AC007899.1-201ENST00000412776 775 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 RPL4P4-201ENST00000422486 1284 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 RPS27AP7-201ENST00000422792 455 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 RPS3AP44-201ENST00000425466 790 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 AC083939.1-201ENST00000445475 126 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 IGBP1P3-201ENST00000447449 1000 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AL596266.1-201ENST00000448132 400 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AL034397.1-201ENST00000456392 908 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 RNA5SP269-201ENST00000459032 137 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 OR52A4P-201ENST00000472867 958 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC107956.2-201ENST00000496042 454 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 FTH1P24-201ENST00000503502 462 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VAMP1P23763 CFL1P5-201ENST00000508046 502 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 CBX3P3-201ENST00000508108 532 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 UQCRBP3-201ENST00000509483 312 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC091839.1-201ENST00000513087 269 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 AC078795.2-201ENST00000602835 1252 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 CR382285.1-202ENST00000604687 547 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC005084.1-201ENST00000605160 304 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 uc_338.24-201ENST00000617802 182 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 TSHZ2-205ENST00000626626 670 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 CASC19-212ENST00000641153 1287 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.49□□□□□ -1.37
VAMP1P23763 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC6.49□□□□□ -1.37
VAMP1P23763 AP005139.1-201ENST00000580702 1647 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VAMP1P23763 AC018688.1-201ENST00000636528 1754 ntBASIC6.49□□□□□ -1.37
VAMP1P23763 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.49□□□□□ -1.37
VAMP1P23763 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
VAMP1P23763 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
VAMP1P23763 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.48□□□□□ -1.37
VAMP1P23763 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.48□□□□□ -1.37
VAMP1P23763 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.48□□□□□ -1.37
VAMP1P23763 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.48□□□□□ -1.37
VAMP1P23763 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
VAMP1P23763 AP002800.1-201ENST00000624982 2225 ntBASIC6.48□□□□□ -1.37
VAMP1P23763 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.48□□□□□ -1.37
VAMP1P23763 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VAMP1P23763 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VAMP1P23763 RNU4-91P-201ENST00000364778 135 ntBASIC6.48□□□□□ -1.37
VAMP1P23763 AC087752.1-201ENST00000391360 558 ntBASIC6.48□□□□□ -1.37
VAMP1P23763 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.48□□□□□ -1.37
VAMP1P23763 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 272.8 ms